Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC022616.7-201ENST00000525383 220 ntBASIC13.81□□□□□ -0.2
VBP1P61758 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.81□□□□□ -0.2
VBP1P61758 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.81□□□□□ -0.2
VBP1P61758 ACTL9-202ENST00000612068 1252 ntBASIC13.81□□□□□ -0.2
VBP1P61758 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
VBP1P61758 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.81□□□□□ -0.2
VBP1P61758 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 AC015909.5-201ENST00000624336 2266 ntBASIC13.81□□□□□ -0.2
VBP1P61758 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.81□□□□□ -0.2
VBP1P61758 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.81□□□□□ -0.2
VBP1P61758 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.81□□□□□ -0.2
VBP1P61758 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.81□□□□□ -0.2
VBP1P61758 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
VBP1P61758 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
VBP1P61758 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VBP1P61758 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
VBP1P61758 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.8□□□□□ -0.2
VBP1P61758 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 AC084364.1-201ENST00000551967 1556 ntBASIC13.8□□□□□ -0.2
VBP1P61758 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.8□□□□□ -0.2
VBP1P61758 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
VBP1P61758 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.8□□□□□ -0.2
VBP1P61758 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.8□□□□□ -0.2
VBP1P61758 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.8□□□□□ -0.2
VBP1P61758 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.8□□□□□ -0.2
VBP1P61758 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.8□□□□□ -0.2
VBP1P61758 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VBP1P61758 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.8□□□□□ -0.2
VBP1P61758 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VBP1P61758 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.8□□□□□ -0.2
VBP1P61758 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VBP1P61758 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.79□□□□□ -0.2
VBP1P61758 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
VBP1P61758 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
VBP1P61758 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VBP1P61758 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.79□□□□□ -0.2
VBP1P61758 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
VBP1P61758 AL591122.2-201ENST00000624125 1853 ntBASIC13.79□□□□□ -0.2
VBP1P61758 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms