Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFRA1P56159 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.69□□□□□ -0.22
GFRA1P56159 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.69□□□□□ -0.22
GFRA1P56159 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.69□□□□□ -0.22
GFRA1P56159 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
GFRA1P56159 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFRA1P56159 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GFRA1P56159 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.69□□□□□ -0.22
GFRA1P56159 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFRA1P56159 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GFRA1P56159 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GFRA1P56159 AC055811.4-201ENST00000624039 1754 ntBASIC13.68□□□□□ -0.22
GFRA1P56159 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.68□□□□□ -0.22
GFRA1P56159 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.68□□□□□ -0.22
GFRA1P56159 AC022532.1-201ENST00000624563 1728 ntBASIC13.68□□□□□ -0.22
GFRA1P56159 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GFRA1P56159 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.68□□□□□ -0.22
GFRA1P56159 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.68□□□□□ -0.22
GFRA1P56159 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.68□□□□□ -0.22
GFRA1P56159 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.68□□□□□ -0.22
GFRA1P56159 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.68□□□□□ -0.22
GFRA1P56159 AC007274.1-201ENST00000439805 662 ntBASIC13.68□□□□□ -0.22
GFRA1P56159 AC245100.3-201ENST00000441281 285 ntBASIC13.68□□□□□ -0.22
GFRA1P56159 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.68□□□□□ -0.22
GFRA1P56159 AL590640.2-201ENST00000457038 527 ntBASIC13.68□□□□□ -0.22
GFRA1P56159 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 RNA5SP412-201ENST00000516234 123 ntBASIC13.68□□□□□ -0.22
GFRA1P56159 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.68□□□□□ -0.22
GFRA1P56159 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
GFRA1P56159 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.68□□□□□ -0.22
GFRA1P56159 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 AC006453.4-201ENST00000636949 1252 ntBASIC13.68□□□□□ -0.22
GFRA1P56159 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.68□□□□□ -0.22
GFRA1P56159 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GFRA1P56159 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.68□□□□□ -0.22
GFRA1P56159 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GFRA1P56159 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
GFRA1P56159 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.67□□□□□ -0.22
GFRA1P56159 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.67□□□□□ -0.22
GFRA1P56159 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
GFRA1P56159 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.67□□□□□ -0.22
GFRA1P56159 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
GFRA1P56159 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 TPM3P8-201ENST00000330554 643 ntBASIC13.67□□□□□ -0.22
GFRA1P56159 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
GFRA1P56159 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GFRA1P56159 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.67□□□□□ -0.22
GFRA1P56159 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.67□□□□□ -0.22
GFRA1P56159 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.67□□□□□ -0.22
GFRA1P56159 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GFRA1P56159 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.67□□□□□ -0.22
GFRA1P56159 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.67□□□□□ -0.22
GFRA1P56159 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.67□□□□□ -0.22
GFRA1P56159 ECM1P1-201ENST00000604092 1279 ntBASIC13.67□□□□□ -0.22
GFRA1P56159 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.67□□□□□ -0.22
GFRA1P56159 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms