Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE1AP54750 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
PDE1AP54750 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE1AP54750 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PDE1AP54750 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PDE1AP54750 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PDE1AP54750 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE1AP54750 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
PDE1AP54750 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE1AP54750 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PDE1AP54750 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PDE1AP54750 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PDE1AP54750 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PDE1AP54750 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.67■□□□□ 0.58
PDE1AP54750 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.67■□□□□ 0.58
PDE1AP54750 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDE1AP54750 AC005252.2-201ENST00000624630 1141 ntBASIC18.67■□□□□ 0.58
PDE1AP54750 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
PDE1AP54750 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDE1AP54750 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE1AP54750 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE1AP54750 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE1AP54750 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.66■□□□□ 0.58
PDE1AP54750 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PDE1AP54750 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.66■□□□□ 0.58
PDE1AP54750 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
PDE1AP54750 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.66■□□□□ 0.58
PDE1AP54750 SOCS2P1-201ENST00000417727 557 ntBASIC18.66■□□□□ 0.58
PDE1AP54750 NUS1P3-201ENST00000423502 862 ntBASIC18.66■□□□□ 0.58
PDE1AP54750 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PDE1AP54750 AP001582.1-201ENST00000525856 295 ntBASIC18.66■□□□□ 0.58
PDE1AP54750 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.66■□□□□ 0.58
PDE1AP54750 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.66■□□□□ 0.58
PDE1AP54750 WFDC1-204ENST00000613603 549 ntBASIC18.66■□□□□ 0.58
PDE1AP54750 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDE1AP54750 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PDE1AP54750 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PDE1AP54750 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDE1AP54750 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDE1AP54750 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.66■□□□□ 0.58
PDE1AP54750 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDE1AP54750 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE1AP54750 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 AC018442.1-201ENST00000421439 2061 ntBASIC18.65■□□□□ 0.58
PDE1AP54750 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.65■□□□□ 0.58
PDE1AP54750 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE1AP54750 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.65■□□□□ 0.58
PDE1AP54750 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDE1AP54750 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE1AP54750 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE1AP54750 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE1AP54750 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms