Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PTP4A1P2-201ENST00000546033 454 ntBASIC16.27■□□□□ 0.2
CACNA2D1P54289 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 MIR4259-201ENST00000584466 101 ntBASIC16.27■□□□□ 0.2
CACNA2D1P54289 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 SSR4P1-203ENST00000599569 2260 ntBASIC16.27■□□□□ 0.2
CACNA2D1P54289 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CACNA2D1P54289 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CACNA2D1P54289 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
CACNA2D1P54289 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CACNA2D1P54289 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CACNA2D1P54289 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CACNA2D1P54289 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.27■□□□□ 0.19
CACNA2D1P54289 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CACNA2D1P54289 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CACNA2D1P54289 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.27■□□□□ 0.19
CACNA2D1P54289 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.27■□□□□ 0.19
CACNA2D1P54289 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CACNA2D1P54289 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CACNA2D1P54289 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 AC134312.5-201ENST00000568031 1313 ntBASIC16.26■□□□□ 0.19
CACNA2D1P54289 AC093525.8-201ENST00000624099 1342 ntBASIC16.26■□□□□ 0.19
CACNA2D1P54289 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 AC138035.3-201ENST00000622706 2791 ntBASIC16.26■□□□□ 0.19
CACNA2D1P54289 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 ATP5G2P4-201ENST00000442175 420 ntBASIC16.26■□□□□ 0.19
CACNA2D1P54289 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 AC022137.2-201ENST00000503482 481 ntBASIC16.26■□□□□ 0.19
CACNA2D1P54289 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 SNX18-202ENST00000343017 3140 ntBASIC16.26■□□□□ 0.19
CACNA2D1P54289 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 CICP4-201ENST00000447359 2812 ntBASIC16.26■□□□□ 0.19
CACNA2D1P54289 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CACNA2D1P54289 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 AC112693.3-201ENST00000624819 1983 ntBASIC16.26■□□□□ 0.19
CACNA2D1P54289 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CACNA2D1P54289 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC022532.1-201ENST00000624563 1728 ntBASIC16.25■□□□□ 0.19
CACNA2D1P54289 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 RNU1-114P-201ENST00000365297 166 ntBASIC16.25■□□□□ 0.19
CACNA2D1P54289 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC092933.1-201ENST00000393644 945 ntBASIC16.25■□□□□ 0.19
CACNA2D1P54289 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms