Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.78■□□□□ 0.12
ATXN3P54252 AC103810.3-201ENST00000583567 96 ntBASIC15.78■□□□□ 0.12
ATXN3P54252 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.78■□□□□ 0.12
ATXN3P54252 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.78■□□□□ 0.12
ATXN3P54252 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.78■□□□□ 0.12
ATXN3P54252 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATXN3P54252 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.78■□□□□ 0.12
ATXN3P54252 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.77■□□□□ 0.12
ATXN3P54252 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
ATXN3P54252 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ATXN3P54252 TUBB1P2-201ENST00000422712 1306 ntBASIC15.77■□□□□ 0.12
ATXN3P54252 TUBB1P1-201ENST00000503144 1300 ntBASIC15.77■□□□□ 0.12
ATXN3P54252 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ATXN3P54252 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ATXN3P54252 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.77■□□□□ 0.12
ATXN3P54252 PFN1P12-201ENST00000455938 534 ntBASIC15.77■□□□□ 0.12
ATXN3P54252 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.77■□□□□ 0.12
ATXN3P54252 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.77■□□□□ 0.12
ATXN3P54252 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ATXN3P54252 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.77■□□□□ 0.12
ATXN3P54252 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.77■□□□□ 0.12
ATXN3P54252 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.77■□□□□ 0.12
ATXN3P54252 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.77■□□□□ 0.12
ATXN3P54252 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATXN3P54252 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.77■□□□□ 0.11
ATXN3P54252 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.11
ATXN3P54252 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATXN3P54252 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATXN3P54252 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
ATXN3P54252 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
ATXN3P54252 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATXN3P54252 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 AC020907.1-201ENST00000616460 1350 ntBASIC15.76■□□□□ 0.11
ATXN3P54252 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.76■□□□□ 0.11
ATXN3P54252 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ATXN3P54252 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.76■□□□□ 0.11
ATXN3P54252 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 MIR1908-201ENST00000410394 80 ntBASIC15.76■□□□□ 0.11
ATXN3P54252 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.76■□□□□ 0.11
ATXN3P54252 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.76■□□□□ 0.11
ATXN3P54252 AL442647.2-201ENST00000429864 857 ntBASIC15.76■□□□□ 0.11
ATXN3P54252 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.76■□□□□ 0.11
ATXN3P54252 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ATXN3P54252 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.76■□□□□ 0.11
ATXN3P54252 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATXN3P54252 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.76■□□□□ 0.11
ATXN3P54252 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms