Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
LBX1P52954 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LBX1P52954 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.84■□□□□ 0.29
LBX1P52954 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.84■□□□□ 0.29
LBX1P52954 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.84■□□□□ 0.29
LBX1P52954 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LBX1P52954 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.84■□□□□ 0.29
LBX1P52954 RBPMSLP-201ENST00000433427 502 ntBASIC16.84■□□□□ 0.29
LBX1P52954 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.84■□□□□ 0.29
LBX1P52954 RPL18AP8-201ENST00000486071 528 ntBASIC16.84■□□□□ 0.29
LBX1P52954 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC16.84■□□□□ 0.29
LBX1P52954 AC124068.2-201ENST00000569473 1109 ntBASIC16.84■□□□□ 0.29
LBX1P52954 MIR4640-201ENST00000581824 90 ntBASIC16.84■□□□□ 0.29
LBX1P52954 NEK4P3-201ENST00000604859 544 ntBASIC16.84■□□□□ 0.29
LBX1P52954 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
LBX1P52954 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LBX1P52954 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LBX1P52954 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.84■□□□□ 0.29
LBX1P52954 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.84■□□□□ 0.29
LBX1P52954 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
LBX1P52954 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
LBX1P52954 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LBX1P52954 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LBX1P52954 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LBX1P52954 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LBX1P52954 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LBX1P52954 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LBX1P52954 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.83■□□□□ 0.28
LBX1P52954 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LBX1P52954 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC16.83■□□□□ 0.28
LBX1P52954 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.83■□□□□ 0.28
LBX1P52954 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LBX1P52954 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC16.83■□□□□ 0.28
LBX1P52954 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 RN7SL530P-201ENST00000485097 298 ntBASIC16.83■□□□□ 0.28
LBX1P52954 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LBX1P52954 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC16.83■□□□□ 0.28
LBX1P52954 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LBX1P52954 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC16.83■□□□□ 0.28
LBX1P52954 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LBX1P52954 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC16.83■□□□□ 0.28
LBX1P52954 LINC00244-201ENST00000625073 613 ntBASIC16.83■□□□□ 0.28
LBX1P52954 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LBX1P52954 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.83■□□□□ 0.28
LBX1P52954 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LBX1P52954 AC004408.2-201ENST00000623613 2777 ntBASIC16.83■□□□□ 0.28
LBX1P52954 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LBX1P52954 AC005052.1-201ENST00000625181 2492 ntBASIC16.82■□□□□ 0.28
LBX1P52954 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.82■□□□□ 0.28
LBX1P52954 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LBX1P52954 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.82■□□□□ 0.28
LBX1P52954 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
LBX1P52954 AC011477.6-201ENST00000604980 1927 ntBASIC16.82■□□□□ 0.28
LBX1P52954 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.82■□□□□ 0.28
LBX1P52954 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.82■□□□□ 0.28
LBX1P52954 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.82■□□□□ 0.28
LBX1P52954 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC16.82■□□□□ 0.28
LBX1P52954 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.82■□□□□ 0.28
LBX1P52954 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.82■□□□□ 0.28
LBX1P52954 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC16.82■□□□□ 0.28
LBX1P52954 AC131206.1-201ENST00000538078 1211 ntBASIC16.82■□□□□ 0.28
LBX1P52954 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 NF1P11-201ENST00000621292 1282 ntBASIC16.82■□□□□ 0.28
LBX1P52954 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.82■□□□□ 0.28
LBX1P52954 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LBX1P52954 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms