Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
ZNF140P52738 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF140P52738 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
ZNF140P52738 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.21■□□□□ 0.02
ZNF140P52738 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.21■□□□□ 0.02
ZNF140P52738 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
ZNF140P52738 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.21■□□□□ 0.02
ZNF140P52738 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.21■□□□□ 0.02
ZNF140P52738 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF140P52738 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF140P52738 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
ZNF140P52738 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF140P52738 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ZNF140P52738 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF140P52738 ACKR1-201ENST00000368121 1240 ntBASIC15.2■□□□□ 0.02
ZNF140P52738 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF140P52738 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF140P52738 AC114812.1-204ENST00000449669 728 ntBASIC15.2■□□□□ 0.02
ZNF140P52738 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF140P52738 DUX4L47-201ENST00000566374 394 ntBASIC15.2■□□□□ 0.02
ZNF140P52738 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.2■□□□□ 0.02
ZNF140P52738 MIR3197-201ENST00000582241 73 ntBASIC15.2■□□□□ 0.02
ZNF140P52738 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF140P52738 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF140P52738 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF140P52738 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF140P52738 AC025048.6-201ENST00000634326 1161 ntBASIC15.2■□□□□ 0.02
ZNF140P52738 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF140P52738 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ZNF140P52738 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF140P52738 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF140P52738 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF140P52738 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF140P52738 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZNF140P52738 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF140P52738 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF140P52738 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ZNF140P52738 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF140P52738 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF140P52738 LINC02228-204ENST00000642115 2962 ntBASIC15.19■□□□□ 0.02
ZNF140P52738 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ZNF140P52738 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF140P52738 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF140P52738 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ZNF140P52738 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.19■□□□□ 0.02
ZNF140P52738 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.19■□□□□ 0.02
ZNF140P52738 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 AP006294.1-201ENST00000415407 339 ntBASIC15.19■□□□□ 0.02
ZNF140P52738 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.19■□□□□ 0.02
ZNF140P52738 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF140P52738 AC022137.2-201ENST00000503482 481 ntBASIC15.19■□□□□ 0.02
ZNF140P52738 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ZNF140P52738 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.19■□□□□ 0.02
ZNF140P52738 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms