Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK7P50613 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.85■□□□□ 0.29
CDK7P50613 ACTG1P2-201ENST00000415776 1125 ntBASIC16.85■□□□□ 0.29
CDK7P50613 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDK7P50613 ACTG1P11-201ENST00000425411 1125 ntBASIC16.85■□□□□ 0.29
CDK7P50613 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK7P50613 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.85■□□□□ 0.29
CDK7P50613 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK7P50613 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.85■□□□□ 0.29
CDK7P50613 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK7P50613 AL161670.2-201ENST00000557650 1227 ntBASIC16.85■□□□□ 0.29
CDK7P50613 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK7P50613 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDK7P50613 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK7P50613 AC018635.2-201ENST00000608625 364 ntBASIC16.85■□□□□ 0.29
CDK7P50613 AL353726.2-201ENST00000623259 884 ntBASIC16.85■□□□□ 0.29
CDK7P50613 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CDK7P50613 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK7P50613 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDK7P50613 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CDK7P50613 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK7P50613 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK7P50613 AL662844.4-201ENST00000606367 2838 ntBASIC16.84■□□□□ 0.29
CDK7P50613 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
CDK7P50613 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.84■□□□□ 0.29
CDK7P50613 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDK7P50613 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.84■□□□□ 0.29
CDK7P50613 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK7P50613 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK7P50613 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CDK7P50613 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK7P50613 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK7P50613 AC011742.3-201ENST00000439053 820 ntBASIC16.84■□□□□ 0.29
CDK7P50613 AC012618.1-201ENST00000461223 412 ntBASIC16.84■□□□□ 0.29
CDK7P50613 AC021723.1-201ENST00000486306 515 ntBASIC16.84■□□□□ 0.29
CDK7P50613 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK7P50613 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDK7P50613 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK7P50613 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.84■□□□□ 0.29
CDK7P50613 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK7P50613 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK7P50613 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 MIR7845-201ENST00000618396 99 ntBASIC16.84■□□□□ 0.29
CDK7P50613 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CDK7P50613 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 AC004923.1-202ENST00000642106 209 ntBASIC16.84■□□□□ 0.29
CDK7P50613 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK7P50613 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.84■□□□□ 0.29
CDK7P50613 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CDK7P50613 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDK7P50613 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK7P50613 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK7P50613 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK7P50613 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDK7P50613 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDK7P50613 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDK7P50613 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CDK7P50613 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDK7P50613 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.83■□□□□ 0.29
CDK7P50613 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDK7P50613 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms