Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CLDN4-203ENST00000435050 4163 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 ZNF384-203ENST00000361959 2978 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
PCP4P48539 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 NRG1-212ENST00000521670 1769 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
PCP4P48539 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
PCP4P48539 ACTN3-201ENST00000502692 3084 ntTSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 POM121B-201ENST00000380760 2487 ntBASIC10.11□□□□□ -0.79
PCP4P48539 ESYT1-201ENST00000267113 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 KY-205ENST00000508956 2422 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 CYP4F62P-202ENST00000439137 2144 ntTSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 ZFYVE28-206ENST00000508471 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 MTMR11-202ENST00000439741 2827 ntAPPRIS P4 TSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC10.11□□□□□ -0.79
PCP4P48539 SLC12A4-203ENST00000537830 3525 ntTSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 FERMT1-204ENST00000536936 3229 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 ZNF446-205ENST00000596341 3922 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
PCP4P48539 KLC2-202ENST00000394065 3755 ntTSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 ILK-202ENST00000396751 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 SYNJ2-204ENST00000367122 3029 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 NBPF4-201ENST00000415641 2485 ntAPPRIS P2 TSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
PCP4P48539 NBPF6-202ENST00000495380 2494 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
PCP4P48539 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 HS1BP3-202ENST00000402541 4358 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
PCP4P48539 TBCCD1-205ENST00000446782 2186 ntTSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 KLKB1-207ENST00000513864 2175 ntTSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC10.11□□□□□ -0.79
PCP4P48539 MOV10-204ENST00000413052 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PCP4P48539 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
PCP4P48539 LINC01254-201ENST00000566225 2908 ntBASIC10.1□□□□□ -0.79
PCP4P48539 CHRNA7-224ENST00000637183 2912 ntTSL 5 BASIC10.1□□□□□ -0.79
PCP4P48539 PDE4C-203ENST00000447275 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 SETD4-201ENST00000332131 3015 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
PCP4P48539 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
PCP4P48539 PWP1-201ENST00000412830 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 RCC2P6-201ENST00000526625 1557 ntBASIC10.1□□□□□ -0.79
PCP4P48539 LY9-205ENST00000392203 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 LOXL3-201ENST00000264094 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 HIP1-207ENST00000616821 3120 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 CSF3R-205ENST00000373106 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 UTP3-201ENST00000254803 2073 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
PCP4P48539 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 SEMA4A-202ENST00000368282 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.1□□□□□ -0.79
PCP4P48539 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC10.1□□□□□ -0.79
PCP4P48539 SFI1-204ENST00000400289 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 SPECC1L-204ENST00000437398 6674 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 MPP2-220ENST00000622681 4242 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
PCP4P48539 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 SIRT1-204ENST00000432464 3587 ntTSL 5 BASIC10.1□□□□□ -0.79
PCP4P48539 HLA-J-202ENST00000469281 1241 ntBASIC10.1□□□□□ -0.79
PCP4P48539 VIT-208ENST00000497382 2650 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 DEPDC1-201ENST00000370966 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
PCP4P48539 CPSF3-202ENST00000460593 3157 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
PCP4P48539 AL096817.1-201ENST00000623904 1775 ntBASIC10.1□□□□□ -0.79
PCP4P48539 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC10.1□□□□□ -0.79
PCP4P48539 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC10.1□□□□□ -0.79
PCP4P48539 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 SLC18A1-205ENST00000440926 2956 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
PCP4P48539 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
PCP4P48539 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
PCP4P48539 MIP-201ENST00000257979 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC10.1□□□□□ -0.79
PCP4P48539 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC10.1□□□□□ -0.79
PCP4P48539 SLC7A7-202ENST00000397528 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 SLC7A7-203ENST00000397529 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
PCP4P48539 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
PCP4P48539 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 ESM1-202ENST00000381405 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms