Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A3P43003 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 AC139749.1-202ENST00000617529 3139 ntBASIC14.17□□□□□ -0.14
SLC1A3P43003 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A3P43003 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC1A3P43003 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A3P43003 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC1A3P43003 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.16□□□□□ -0.14
SLC1A3P43003 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A3P43003 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC1A3P43003 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC1A3P43003 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC1A3P43003 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC1A3P43003 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A3P43003 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC1A3P43003 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC1A3P43003 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC1A3P43003 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC1A3P43003 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC1A3P43003 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC1A3P43003 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SLC1A3P43003 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
SLC1A3P43003 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A3P43003 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC1A3P43003 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A3P43003 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SLC1A3P43003 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A3P43003 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A3P43003 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A3P43003 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A3P43003 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC1A3P43003 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC1A3P43003 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A3P43003 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A3P43003 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC1A3P43003 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.15□□□□□ -0.14
SLC1A3P43003 MEIS3P1-201ENST00000495167 958 ntBASIC14.15□□□□□ -0.14
SLC1A3P43003 AC135586.1-201ENST00000539323 574 ntBASIC14.15□□□□□ -0.14
SLC1A3P43003 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.15□□□□□ -0.14
SLC1A3P43003 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 AL390955.2-201ENST00000603032 514 ntBASIC14.15□□□□□ -0.14
SLC1A3P43003 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 ZBED1P1-201ENST00000502364 1930 ntBASIC14.15□□□□□ -0.14
SLC1A3P43003 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A3P43003 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A3P43003 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SLC1A3P43003 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A3P43003 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SLC1A3P43003 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A3P43003 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC1A3P43003 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SLC1A3P43003 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A3P43003 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SLC1A3P43003 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms