Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
GRIA1P42261 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
GRIA1P42261 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
GRIA1P42261 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 AC097359.2-201ENST00000604992 2389 ntBASIC15.55■□□□□ 0.08
GRIA1P42261 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.55■□□□□ 0.08
GRIA1P42261 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
GRIA1P42261 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
GRIA1P42261 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
GRIA1P42261 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
GRIA1P42261 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.55■□□□□ 0.08
GRIA1P42261 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.55■□□□□ 0.08
GRIA1P42261 SAMD11P1-201ENST00000571429 661 ntBASIC15.55■□□□□ 0.08
GRIA1P42261 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 AC005498.2-205ENST00000593218 784 ntBASIC15.55■□□□□ 0.08
GRIA1P42261 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 AC015656.1-201ENST00000624209 3578 ntBASIC15.55■□□□□ 0.08
GRIA1P42261 AC068587.6-202ENST00000641839 5619 ntBASIC15.55■□□□□ 0.08
GRIA1P42261 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.55■□□□□ 0.08
GRIA1P42261 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
GRIA1P42261 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GRIA1P42261 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
GRIA1P42261 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
GRIA1P42261 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
GRIA1P42261 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.54■□□□□ 0.08
GRIA1P42261 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.54■□□□□ 0.08
GRIA1P42261 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 AC117489.1-201ENST00000625169 3217 ntBASIC15.54■□□□□ 0.08
GRIA1P42261 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.54■□□□□ 0.08
GRIA1P42261 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.54■□□□□ 0.08
GRIA1P42261 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.54■□□□□ 0.08
GRIA1P42261 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.54■□□□□ 0.08
GRIA1P42261 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.54■□□□□ 0.08
GRIA1P42261 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.54■□□□□ 0.08
GRIA1P42261 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.54■□□□□ 0.08
GRIA1P42261 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.54■□□□□ 0.08
GRIA1P42261 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
GRIA1P42261 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GRIA1P42261 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GRIA1P42261 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
GRIA1P42261 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
GRIA1P42261 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
GRIA1P42261 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.53■□□□□ 0.08
GRIA1P42261 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.53■□□□□ 0.08
GRIA1P42261 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GRIA1P42261 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.53■□□□□ 0.08
GRIA1P42261 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GRIA1P42261 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GRIA1P42261 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GRIA1P42261 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GRIA1P42261 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms