Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC21.07■□□□□ 0.96
CPS1P31327 AQP7P2-201ENST00000453967 1041 ntBASIC21.07■□□□□ 0.96
CPS1P31327 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPS1P31327 IGHEP1-201ENST00000521393 651 ntBASIC21.07■□□□□ 0.96
CPS1P31327 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPS1P31327 AC009884.2-201ENST00000603110 324 ntBASIC21.07■□□□□ 0.96
CPS1P31327 AQP7P3-201ENST00000624547 1041 ntBASIC21.07■□□□□ 0.96
CPS1P31327 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPS1P31327 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPS1P31327 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPS1P31327 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC21.07■□□□□ 0.96
CPS1P31327 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.06■□□□□ 0.96
CPS1P31327 AC015909.3-201ENST00000572855 1794 ntBASIC21.06■□□□□ 0.96
CPS1P31327 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC21.06■□□□□ 0.96
CPS1P31327 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC21.06■□□□□ 0.96
CPS1P31327 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC21.06■□□□□ 0.96
CPS1P31327 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 MIR3188-201ENST00000583494 85 ntBASIC21.06■□□□□ 0.96
CPS1P31327 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC21.06■□□□□ 0.96
CPS1P31327 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC21.06■□□□□ 0.96
CPS1P31327 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CPS1P31327 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CPS1P31327 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPS1P31327 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPS1P31327 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPS1P31327 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPS1P31327 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
CPS1P31327 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPS1P31327 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC21.05■□□□□ 0.96
CPS1P31327 RPSAP15-201ENST00000448168 861 ntBASIC21.05■□□□□ 0.96
CPS1P31327 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC21.05■□□□□ 0.96
CPS1P31327 AC008825.2-201ENST00000603374 718 ntBASIC21.05■□□□□ 0.96
CPS1P31327 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC21.05■□□□□ 0.96
CPS1P31327 AC009560.1-201ENST00000620208 434 ntBASIC21.05■□□□□ 0.96
CPS1P31327 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC21.05■□□□□ 0.96
CPS1P31327 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CPS1P31327 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CPS1P31327 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CPS1P31327 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CPS1P31327 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CPS1P31327 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CPS1P31327 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CPS1P31327 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC21.05■□□□□ 0.96
CPS1P31327 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC21.05■□□□□ 0.96
CPS1P31327 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPS1P31327 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC21.05■□□□□ 0.96
CPS1P31327 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC21.05■□□□□ 0.96
CPS1P31327 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPS1P31327 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPS1P31327 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC21.04■□□□□ 0.96
CPS1P31327 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CPS1P31327 AC006122.1-201ENST00000493323 440 ntBASIC21.04■□□□□ 0.96
CPS1P31327 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC21.04■□□□□ 0.96
CPS1P31327 RPS23-204ENST00000507980 836 ntTSL 2 BASIC21.04■□□□□ 0.96
CPS1P31327 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC21.04■□□□□ 0.96
CPS1P31327 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CPS1P31327 THY1-209ENST00000580275 578 ntTSL 3 BASIC21.04■□□□□ 0.96
CPS1P31327 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC21.04■□□□□ 0.96
CPS1P31327 AC007326.1-201ENST00000604539 458 ntBASIC21.04■□□□□ 0.96
CPS1P31327 AC011471.3-201ENST00000623576 402 ntBASIC21.04■□□□□ 0.96
CPS1P31327 AC233280.19-201ENST00000633223 136 ntBASIC21.04■□□□□ 0.96
CPS1P31327 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC21.04■□□□□ 0.96
CPS1P31327 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC21.04■□□□□ 0.96
CPS1P31327 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.04■□□□□ 0.96
CPS1P31327 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC21.04■□□□□ 0.96
CPS1P31327 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC21.04■□□□□ 0.96
CPS1P31327 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CPS1P31327 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 AL135901.1-201ENST00000451812 333 ntBASIC21.04■□□□□ 0.96
CPS1P31327 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms