Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 PIN1P1-201ENST00000412108 996 ntBASIC16.09■□□□□ 0.17
MMP8P22894 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.09■□□□□ 0.17
MMP8P22894 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.09■□□□□ 0.17
MMP8P22894 ELK1P1-201ENST00000485699 580 ntBASIC16.09■□□□□ 0.17
MMP8P22894 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.09■□□□□ 0.17
MMP8P22894 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP8P22894 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP8P22894 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.09■□□□□ 0.17
MMP8P22894 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MMP8P22894 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MMP8P22894 MIR4745-201ENST00000577608 62 ntBASIC16.09■□□□□ 0.17
MMP8P22894 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP8P22894 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.09■□□□□ 0.17
MMP8P22894 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP8P22894 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
MMP8P22894 AL137783.1-201ENST00000623494 1896 ntBASIC16.09■□□□□ 0.17
MMP8P22894 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MMP8P22894 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
MMP8P22894 FAM45BP-202ENST00000592932 1624 ntBASIC16.08■□□□□ 0.17
MMP8P22894 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.08■□□□□ 0.17
MMP8P22894 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MMP8P22894 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.08■□□□□ 0.17
MMP8P22894 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MMP8P22894 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
MMP8P22894 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
MMP8P22894 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MMP8P22894 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.08■□□□□ 0.17
MMP8P22894 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.08■□□□□ 0.16
MMP8P22894 AL139094.1-201ENST00000405549 1188 ntBASIC16.08■□□□□ 0.16
MMP8P22894 SOCS2P1-201ENST00000417727 557 ntBASIC16.08■□□□□ 0.16
MMP8P22894 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.08■□□□□ 0.16
MMP8P22894 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.08■□□□□ 0.16
MMP8P22894 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP8P22894 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP8P22894 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.08■□□□□ 0.16
MMP8P22894 CTBP2P3-201ENST00000585629 1255 ntBASIC16.08■□□□□ 0.16
MMP8P22894 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP8P22894 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.08■□□□□ 0.16
MMP8P22894 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.08■□□□□ 0.16
MMP8P22894 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.08■□□□□ 0.16
MMP8P22894 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP8P22894 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP8P22894 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MMP8P22894 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP8P22894 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP8P22894 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP8P22894 AC018442.1-201ENST00000421439 2061 ntBASIC16.07■□□□□ 0.16
MMP8P22894 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
MMP8P22894 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
MMP8P22894 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MMP8P22894 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP8P22894 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 AC018529.2-202ENST00000611482 3087 ntBASIC16.07■□□□□ 0.16
MMP8P22894 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms