Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 RPL18P13-201ENST00000478088 569 ntBASIC16.85■□□□□ 0.29
SMPD1P17405 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.85■□□□□ 0.29
SMPD1P17405 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.85■□□□□ 0.29
SMPD1P17405 MIR3907-201ENST00000579424 151 ntBASIC16.85■□□□□ 0.29
SMPD1P17405 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMPD1P17405 AL133499.1-201ENST00000596207 608 ntBASIC16.85■□□□□ 0.29
SMPD1P17405 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.85■□□□□ 0.29
SMPD1P17405 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SMPD1P17405 AC090164.2-201ENST00000611487 516 ntBASIC16.85■□□□□ 0.29
SMPD1P17405 AC079336.7-201ENST00000623428 1078 ntBASIC16.85■□□□□ 0.29
SMPD1P17405 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.85■□□□□ 0.29
SMPD1P17405 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.85■□□□□ 0.29
SMPD1P17405 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
SMPD1P17405 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.85■□□□□ 0.29
SMPD1P17405 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.85■□□□□ 0.29
SMPD1P17405 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.85■□□□□ 0.29
SMPD1P17405 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.84■□□□□ 0.29
SMPD1P17405 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.84■□□□□ 0.29
SMPD1P17405 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMPD1P17405 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SMPD1P17405 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.84■□□□□ 0.29
SMPD1P17405 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.84■□□□□ 0.29
SMPD1P17405 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.84■□□□□ 0.29
SMPD1P17405 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 FXNP2-201ENST00000411625 547 ntBASIC16.84■□□□□ 0.29
SMPD1P17405 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.84■□□□□ 0.29
SMPD1P17405 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.84■□□□□ 0.29
SMPD1P17405 AC125604.1-201ENST00000496255 707 ntBASIC16.84■□□□□ 0.29
SMPD1P17405 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.84■□□□□ 0.29
SMPD1P17405 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.84■□□□□ 0.29
SMPD1P17405 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.84■□□□□ 0.29
SMPD1P17405 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.84■□□□□ 0.29
SMPD1P17405 MIR4722-201ENST00000578292 60 ntBASIC16.84■□□□□ 0.29
SMPD1P17405 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.84■□□□□ 0.29
SMPD1P17405 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SMPD1P17405 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.84■□□□□ 0.29
SMPD1P17405 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.84■□□□□ 0.29
SMPD1P17405 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.84■□□□□ 0.29
SMPD1P17405 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMPD1P17405 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SMPD1P17405 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMPD1P17405 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMPD1P17405 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMPD1P17405 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
SMPD1P17405 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.83■□□□□ 0.28
SMPD1P17405 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.83■□□□□ 0.28
SMPD1P17405 PUDPP3-201ENST00000445368 636 ntBASIC16.83■□□□□ 0.28
SMPD1P17405 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.83■□□□□ 0.28
SMPD1P17405 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.83■□□□□ 0.28
SMPD1P17405 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.83■□□□□ 0.28
SMPD1P17405 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.83■□□□□ 0.28
SMPD1P17405 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.83■□□□□ 0.28
SMPD1P17405 AL160314.3-201ENST00000556041 767 ntBASIC16.83■□□□□ 0.28
SMPD1P17405 AL161670.2-201ENST00000557650 1227 ntBASIC16.83■□□□□ 0.28
SMPD1P17405 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SMPD1P17405 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.83■□□□□ 0.28
SMPD1P17405 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SMPD1P17405 SNORD3B-2-202ENST00000571722 791 ntBASIC16.83■□□□□ 0.28
SMPD1P17405 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.83■□□□□ 0.28
SMPD1P17405 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.83■□□□□ 0.28
SMPD1P17405 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SMPD1P17405 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMPD1P17405 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms