Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
H2AFXP16104 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.91■□□□□ 0.14
H2AFXP16104 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC15.91■□□□□ 0.14
H2AFXP16104 LILRP1-201ENST00000444199 1370 ntBASIC15.91■□□□□ 0.14
H2AFXP16104 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
H2AFXP16104 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.91■□□□□ 0.14
H2AFXP16104 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.91■□□□□ 0.14
H2AFXP16104 CXCL1P1-201ENST00000502804 216 ntBASIC15.91■□□□□ 0.14
H2AFXP16104 AC098859.1-201ENST00000502915 1238 ntBASIC15.91■□□□□ 0.14
H2AFXP16104 AC136632.2-201ENST00000512891 861 ntBASIC15.91■□□□□ 0.14
H2AFXP16104 AP000867.3-201ENST00000524675 377 ntBASIC15.91■□□□□ 0.14
H2AFXP16104 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.91■□□□□ 0.14
H2AFXP16104 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.91■□□□□ 0.14
H2AFXP16104 MIR3180-1-201ENST00000580374 94 ntBASIC15.91■□□□□ 0.14
H2AFXP16104 MIR3180-3-201ENST00000584616 94 ntBASIC15.91■□□□□ 0.14
H2AFXP16104 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.91■□□□□ 0.14
H2AFXP16104 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.91■□□□□ 0.14
H2AFXP16104 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.91■□□□□ 0.14
H2AFXP16104 AC012306.2-201ENST00000609350 630 ntBASIC15.91■□□□□ 0.14
H2AFXP16104 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.91■□□□□ 0.14
H2AFXP16104 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.91■□□□□ 0.14
H2AFXP16104 AL355877.3-201ENST00000622820 899 ntBASIC15.91■□□□□ 0.14
H2AFXP16104 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.91■□□□□ 0.14
H2AFXP16104 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.91■□□□□ 0.14
H2AFXP16104 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC15.91■□□□□ 0.14
H2AFXP16104 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
H2AFXP16104 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.91■□□□□ 0.14
H2AFXP16104 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.91■□□□□ 0.14
H2AFXP16104 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2AFXP16104 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.91■□□□□ 0.14
H2AFXP16104 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.9■□□□□ 0.14
H2AFXP16104 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
H2AFXP16104 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.9■□□□□ 0.14
H2AFXP16104 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
H2AFXP16104 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.9■□□□□ 0.14
H2AFXP16104 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.9■□□□□ 0.14
H2AFXP16104 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.9■□□□□ 0.14
H2AFXP16104 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
H2AFXP16104 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
H2AFXP16104 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.9■□□□□ 0.14
H2AFXP16104 AC104076.2-201ENST00000448912 469 ntBASIC15.9■□□□□ 0.14
H2AFXP16104 FGFR3P6-201ENST00000457012 610 ntBASIC15.9■□□□□ 0.14
H2AFXP16104 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.9■□□□□ 0.14
H2AFXP16104 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
H2AFXP16104 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.9■□□□□ 0.14
H2AFXP16104 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.9■□□□□ 0.14
H2AFXP16104 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
H2AFXP16104 AC107918.4-202ENST00000641623 219 ntBASIC15.9■□□□□ 0.14
H2AFXP16104 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
H2AFXP16104 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.9■□□□□ 0.14
H2AFXP16104 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 AC073869.1-201ENST00000415574 2762 ntBASIC15.9■□□□□ 0.14
H2AFXP16104 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.9■□□□□ 0.14
H2AFXP16104 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2AFXP16104 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.9■□□□□ 0.14
H2AFXP16104 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
H2AFXP16104 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
H2AFXP16104 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
H2AFXP16104 PCDHB18P-202ENST00000526308 3197 ntBASIC15.89■□□□□ 0.13
H2AFXP16104 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
H2AFXP16104 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
H2AFXP16104 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms