Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DOBP13765 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DOBP13765 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HLA-DOBP13765 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HLA-DOBP13765 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
HLA-DOBP13765 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
HLA-DOBP13765 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 ACE3P-201ENST00000423435 1973 ntBASIC13.77□□□□□ -0.21
HLA-DOBP13765 BCRP1-201ENST00000444246 691 ntBASIC13.77□□□□□ -0.21
HLA-DOBP13765 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 AJ011932.1-201ENST00000621707 465 ntBASIC13.77□□□□□ -0.21
HLA-DOBP13765 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 AL645728.2-202ENST00000641679 227 ntBASIC13.77□□□□□ -0.21
HLA-DOBP13765 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DOBP13765 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DOBP13765 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.76□□□□□ -0.21
HLA-DOBP13765 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 DRD5P1-201ENST00000456605 1438 ntBASIC13.76□□□□□ -0.21
HLA-DOBP13765 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 AC104457.1-201ENST00000401024 814 ntBASIC13.76□□□□□ -0.21
HLA-DOBP13765 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 GAPDHP40-201ENST00000505218 1006 ntBASIC13.76□□□□□ -0.21
HLA-DOBP13765 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 AC009118.2-201ENST00000613275 655 ntBASIC13.76□□□□□ -0.21
HLA-DOBP13765 AL662799.1-202ENST00000614205 422 ntBASIC13.76□□□□□ -0.21
HLA-DOBP13765 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms