Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 MIR3188-201ENST00000583494 85 ntBASIC17.17■□□□□ 0.34
PTPRFP10586 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.17■□□□□ 0.34
PTPRFP10586 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPRFP10586 AL391005.1-201ENST00000623953 2435 ntBASIC17.17■□□□□ 0.34
PTPRFP10586 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PTPRFP10586 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPRFP10586 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPRFP10586 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.17■□□□□ 0.34
PTPRFP10586 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPRFP10586 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.17■□□□□ 0.34
PTPRFP10586 PHBP15-201ENST00000574228 665 ntBASIC17.17■□□□□ 0.34
PTPRFP10586 AC079328.2-201ENST00000561241 3354 ntBASIC17.17■□□□□ 0.34
PTPRFP10586 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPRFP10586 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPRFP10586 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPRFP10586 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPRFP10586 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPRFP10586 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PTPRFP10586 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 AC144522.1-201ENST00000625111 1658 ntBASIC17.16■□□□□ 0.34
PTPRFP10586 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPRFP10586 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PTPRFP10586 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.16■□□□□ 0.34
PTPRFP10586 RPS9P1-201ENST00000419943 583 ntBASIC17.16■□□□□ 0.34
PTPRFP10586 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPRFP10586 DUTP3-201ENST00000450025 415 ntBASIC17.16■□□□□ 0.34
PTPRFP10586 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.16■□□□□ 0.34
PTPRFP10586 RN7SL258P-201ENST00000478664 300 ntBASIC17.16■□□□□ 0.34
PTPRFP10586 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPRFP10586 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPRFP10586 AC005632.3-201ENST00000605544 308 ntBASIC17.16■□□□□ 0.34
PTPRFP10586 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPRFP10586 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PTPRFP10586 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PTPRFP10586 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPRFP10586 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPRFP10586 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PTPRFP10586 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPRFP10586 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPRFP10586 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PTPRFP10586 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPRFP10586 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.15■□□□□ 0.34
PTPRFP10586 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PTPRFP10586 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PTPRFP10586 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPRFP10586 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 MIR4522-201ENST00000584932 87 ntBASIC17.15■□□□□ 0.34
PTPRFP10586 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPRFP10586 AC087045.2-201ENST00000606279 1003 ntBASIC17.15■□□□□ 0.34
PTPRFP10586 AC092171.5-201ENST00000608012 942 ntBASIC17.15■□□□□ 0.34
PTPRFP10586 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PTPRFP10586 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPRFP10586 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPRFP10586 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPRFP10586 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
PTPRFP10586 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PTPRFP10586 AC074138.1-201ENST00000611182 1303 ntBASIC17.15■□□□□ 0.34
PTPRFP10586 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPRFP10586 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 AP000356.3-201ENST00000382243 753 ntBASIC17.15■□□□□ 0.34
PTPRFP10586 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.15■□□□□ 0.34
PTPRFP10586 FTH1P22-201ENST00000456305 520 ntBASIC17.15■□□□□ 0.34
PTPRFP10586 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPRFP10586 AC103691.2-201ENST00000618824 433 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms