Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.13■□□□□ 0.17
RARAP10276 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.13■□□□□ 0.17
RARAP10276 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RARAP10276 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RARAP10276 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.12■□□□□ 0.17
RARAP10276 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.12■□□□□ 0.17
RARAP10276 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RARAP10276 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.12■□□□□ 0.17
RARAP10276 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.12■□□□□ 0.17
RARAP10276 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.12■□□□□ 0.17
RARAP10276 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RARAP10276 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.12■□□□□ 0.17
RARAP10276 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.12■□□□□ 0.17
RARAP10276 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.12■□□□□ 0.17
RARAP10276 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RARAP10276 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 MRPS18AP1-201ENST00000414458 589 ntBASIC16.12■□□□□ 0.17
RARAP10276 PMS2P2-201ENST00000425039 1128 ntBASIC16.12■□□□□ 0.17
RARAP10276 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.12■□□□□ 0.17
RARAP10276 MEIS3P1-201ENST00000495167 958 ntBASIC16.12■□□□□ 0.17
RARAP10276 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.12■□□□□ 0.17
RARAP10276 AL391069.4-201ENST00000609583 481 ntBASIC16.12■□□□□ 0.17
RARAP10276 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.12■□□□□ 0.17
RARAP10276 AL158212.4-201ENST00000624062 1286 ntBASIC16.12■□□□□ 0.17
RARAP10276 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RARAP10276 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RARAP10276 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.12■□□□□ 0.17
RARAP10276 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
RARAP10276 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.12■□□□□ 0.17
RARAP10276 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RARAP10276 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RARAP10276 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
RARAP10276 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.12■□□□□ 0.17
RARAP10276 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RARAP10276 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RARAP10276 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RARAP10276 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RARAP10276 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.11■□□□□ 0.17
RARAP10276 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.11■□□□□ 0.17
RARAP10276 AL512638.1-201ENST00000457493 794 ntBASIC16.11■□□□□ 0.17
RARAP10276 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
RARAP10276 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.11■□□□□ 0.17
RARAP10276 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.11■□□□□ 0.17
RARAP10276 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.11■□□□□ 0.17
RARAP10276 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.11■□□□□ 0.17
RARAP10276 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.11■□□□□ 0.17
RARAP10276 AC011467.4-201ENST00000594891 528 ntBASIC16.11■□□□□ 0.17
RARAP10276 AC004790.1-201ENST00000612686 536 ntBASIC16.11■□□□□ 0.17
RARAP10276 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.11■□□□□ 0.17
RARAP10276 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.11■□□□□ 0.17
RARAP10276 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RARAP10276 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.11■□□□□ 0.17
RARAP10276 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.11■□□□□ 0.17
RARAP10276 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.11■□□□□ 0.17
RARAP10276 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RARAP10276 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
RARAP10276 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.11■□□□□ 0.17
RARAP10276 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RARAP10276 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RARAP10276 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RARAP10276 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RARAP10276 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
RARAP10276 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms