Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.76□□□□□ -0.05
SEMA3DO95025 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.76□□□□□ -0.05
SEMA3DO95025 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.76□□□□□ -0.05
SEMA3DO95025 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.76□□□□□ -0.05
SEMA3DO95025 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.76□□□□□ -0.05
SEMA3DO95025 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.76□□□□□ -0.05
SEMA3DO95025 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.76□□□□□ -0.05
SEMA3DO95025 SPDYE18-201ENST00000510091 1050 ntBASIC14.76□□□□□ -0.05
SEMA3DO95025 AC093214.1-201ENST00000511688 1107 ntBASIC14.76□□□□□ -0.05
SEMA3DO95025 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.76□□□□□ -0.05
SEMA3DO95025 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.76□□□□□ -0.05
SEMA3DO95025 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.76□□□□□ -0.05
SEMA3DO95025 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.76□□□□□ -0.05
SEMA3DO95025 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.76□□□□□ -0.05
SEMA3DO95025 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.76□□□□□ -0.05
SEMA3DO95025 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.76□□□□□ -0.05
SEMA3DO95025 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SEMA3DO95025 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SEMA3DO95025 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SEMA3DO95025 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SEMA3DO95025 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.75□□□□□ -0.05
SEMA3DO95025 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 AC091951.1-201ENST00000512854 2465 ntBASIC14.75□□□□□ -0.05
SEMA3DO95025 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.75□□□□□ -0.05
SEMA3DO95025 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SEMA3DO95025 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.75□□□□□ -0.05
SEMA3DO95025 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SEMA3DO95025 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.75□□□□□ -0.05
SEMA3DO95025 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.75□□□□□ -0.05
SEMA3DO95025 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.75□□□□□ -0.05
SEMA3DO95025 MRPS18AP1-201ENST00000414458 589 ntBASIC14.75□□□□□ -0.05
SEMA3DO95025 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 CYMP-203ENST00000474680 1263 ntBASIC14.75□□□□□ -0.05
SEMA3DO95025 RNA5SP421-201ENST00000516864 134 ntBASIC14.75□□□□□ -0.05
SEMA3DO95025 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.75□□□□□ -0.05
SEMA3DO95025 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 RARRES2P5-201ENST00000564013 466 ntBASIC14.75□□□□□ -0.05
SEMA3DO95025 AC104794.3-201ENST00000566840 1248 ntBASIC14.75□□□□□ -0.05
SEMA3DO95025 AC036164.1-201ENST00000570544 333 ntBASIC14.75□□□□□ -0.05
SEMA3DO95025 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.75□□□□□ -0.05
SEMA3DO95025 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.75□□□□□ -0.05
SEMA3DO95025 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.75□□□□□ -0.05
SEMA3DO95025 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SEMA3DO95025 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SEMA3DO95025 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.75□□□□□ -0.05
SEMA3DO95025 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.75□□□□□ -0.05
SEMA3DO95025 AC012508.2-201ENST00000567613 1472 ntBASIC14.75□□□□□ -0.05
SEMA3DO95025 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SEMA3DO95025 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SEMA3DO95025 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.75□□□□□ -0.05
SEMA3DO95025 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.74□□□□□ -0.05
SEMA3DO95025 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SEMA3DO95025 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEMA3DO95025 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SEMA3DO95025 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEMA3DO95025 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEMA3DO95025 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.74□□□□□ -0.05
SEMA3DO95025 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEMA3DO95025 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SEMA3DO95025 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.74□□□□□ -0.05
SEMA3DO95025 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SEMA3DO95025 PTENP1-202ENST00000532280 3996 ntBASIC14.74□□□□□ -0.05
SEMA3DO95025 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEMA3DO95025 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SEMA3DO95025 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms