Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.33■□□□□ 0.04
NDUFS3O75489 MEP1AP4-201ENST00000423244 1087 ntBASIC15.33■□□□□ 0.04
NDUFS3O75489 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 FAM86LP-201ENST00000478302 853 ntBASIC15.33■□□□□ 0.04
NDUFS3O75489 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.33■□□□□ 0.04
NDUFS3O75489 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.33■□□□□ 0.04
NDUFS3O75489 AC027796.2-201ENST00000575326 344 ntBASIC15.33■□□□□ 0.04
NDUFS3O75489 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.33■□□□□ 0.04
NDUFS3O75489 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NDUFS3O75489 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.33■□□□□ 0.04
NDUFS3O75489 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.33■□□□□ 0.04
NDUFS3O75489 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NDUFS3O75489 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NDUFS3O75489 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFS3O75489 LINC00528-201ENST00000600723 2160 ntBASIC15.32■□□□□ 0.04
NDUFS3O75489 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NDUFS3O75489 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFS3O75489 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NDUFS3O75489 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFS3O75489 MIR770-201ENST00000390219 98 ntBASIC15.32■□□□□ 0.04
NDUFS3O75489 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.32■□□□□ 0.04
NDUFS3O75489 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFS3O75489 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.32■□□□□ 0.04
NDUFS3O75489 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.32■□□□□ 0.04
NDUFS3O75489 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.32■□□□□ 0.04
NDUFS3O75489 AC023310.3-201ENST00000557027 670 ntBASIC15.32■□□□□ 0.04
NDUFS3O75489 AC100756.1-201ENST00000562736 682 ntBASIC15.32■□□□□ 0.04
NDUFS3O75489 AC138749.3-201ENST00000567691 622 ntBASIC15.32■□□□□ 0.04
NDUFS3O75489 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
NDUFS3O75489 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 AC011467.4-201ENST00000594891 528 ntBASIC15.32■□□□□ 0.04
NDUFS3O75489 AL391069.4-201ENST00000609583 481 ntBASIC15.32■□□□□ 0.04
NDUFS3O75489 AC116165.1-201ENST00000611806 668 ntBASIC15.32■□□□□ 0.04
NDUFS3O75489 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 AC011270.2-201ENST00000624293 2550 ntBASIC15.32■□□□□ 0.04
NDUFS3O75489 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NDUFS3O75489 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NDUFS3O75489 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
NDUFS3O75489 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NDUFS3O75489 AC067750.1-201ENST00000608826 6545 ntBASIC15.32■□□□□ 0.04
NDUFS3O75489 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NDUFS3O75489 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NDUFS3O75489 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS3O75489 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS3O75489 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NDUFS3O75489 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NDUFS3O75489 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.31■□□□□ 0.04
NDUFS3O75489 AP000845.1-201ENST00000581677 2131 ntBASIC15.31■□□□□ 0.04
NDUFS3O75489 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS3O75489 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms