Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.95■□□□□ 0.3
LGR5O75473 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.95■□□□□ 0.3
LGR5O75473 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.95■□□□□ 0.3
LGR5O75473 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
LGR5O75473 EEF1DP1-201ENST00000585891 896 ntBASIC16.95■□□□□ 0.3
LGR5O75473 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.95■□□□□ 0.3
LGR5O75473 AC004466.1-201ENST00000599515 1080 ntBASIC16.95■□□□□ 0.3
LGR5O75473 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.95■□□□□ 0.3
LGR5O75473 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.95■□□□□ 0.3
LGR5O75473 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.95■□□□□ 0.3
LGR5O75473 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LGR5O75473 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LGR5O75473 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.95■□□□□ 0.3
LGR5O75473 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.95■□□□□ 0.3
LGR5O75473 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
LGR5O75473 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.94■□□□□ 0.3
LGR5O75473 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.94■□□□□ 0.3
LGR5O75473 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.94■□□□□ 0.3
LGR5O75473 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.94■□□□□ 0.3
LGR5O75473 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LGR5O75473 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.94■□□□□ 0.3
LGR5O75473 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.94■□□□□ 0.3
LGR5O75473 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
LGR5O75473 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.94■□□□□ 0.3
LGR5O75473 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LGR5O75473 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.94■□□□□ 0.3
LGR5O75473 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LGR5O75473 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.94■□□□□ 0.3
LGR5O75473 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.94■□□□□ 0.3
LGR5O75473 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.94■□□□□ 0.3
LGR5O75473 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.94■□□□□ 0.3
LGR5O75473 MESTP3-201ENST00000503460 968 ntBASIC16.94■□□□□ 0.3
LGR5O75473 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.94■□□□□ 0.3
LGR5O75473 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.94■□□□□ 0.3
LGR5O75473 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.94■□□□□ 0.3
LGR5O75473 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.94■□□□□ 0.3
LGR5O75473 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.94■□□□□ 0.3
LGR5O75473 AC005695.3-201ENST00000614522 232 ntBASIC16.94■□□□□ 0.3
LGR5O75473 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.94■□□□□ 0.3
LGR5O75473 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.94■□□□□ 0.3
LGR5O75473 AL157414.3-201ENST00000624276 1954 ntBASIC16.94■□□□□ 0.3
LGR5O75473 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.94■□□□□ 0.3
LGR5O75473 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.94■□□□□ 0.3
LGR5O75473 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LGR5O75473 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LGR5O75473 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.93■□□□□ 0.3
LGR5O75473 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LGR5O75473 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LGR5O75473 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LGR5O75473 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LGR5O75473 AC012508.2-201ENST00000567613 1472 ntBASIC16.93■□□□□ 0.3
LGR5O75473 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LGR5O75473 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LGR5O75473 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LGR5O75473 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.93■□□□□ 0.3
LGR5O75473 AC015818.8-201ENST00000587907 1519 ntBASIC16.93■□□□□ 0.3
LGR5O75473 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.93■□□□□ 0.3
LGR5O75473 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.93■□□□□ 0.3
LGR5O75473 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LGR5O75473 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LGR5O75473 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
LGR5O75473 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms