Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.6■□□□□ 0.25
EXTL3O43909 AC022494.1-201ENST00000466044 728 ntBASIC16.6■□□□□ 0.25
EXTL3O43909 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.6■□□□□ 0.25
EXTL3O43909 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.6■□□□□ 0.25
EXTL3O43909 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.6■□□□□ 0.25
EXTL3O43909 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.6■□□□□ 0.25
EXTL3O43909 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 AC008735.3-201ENST00000596646 500 ntBASIC16.6■□□□□ 0.25
EXTL3O43909 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.6■□□□□ 0.25
EXTL3O43909 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
EXTL3O43909 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 KRT8P35-201ENST00000483942 1338 ntBASIC16.6■□□□□ 0.25
EXTL3O43909 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.6■□□□□ 0.25
EXTL3O43909 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.6■□□□□ 0.25
EXTL3O43909 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 LILRP1-201ENST00000444199 1370 ntBASIC16.6■□□□□ 0.25
EXTL3O43909 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.6■□□□□ 0.25
EXTL3O43909 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
EXTL3O43909 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.6■□□□□ 0.25
EXTL3O43909 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.59■□□□□ 0.25
EXTL3O43909 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.59■□□□□ 0.25
EXTL3O43909 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.59■□□□□ 0.25
EXTL3O43909 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 AC006058.4-201ENST00000624016 1670 ntBASIC16.59■□□□□ 0.25
EXTL3O43909 LINC00554-201ENST00000564841 3011 ntBASIC16.59■□□□□ 0.25
EXTL3O43909 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
EXTL3O43909 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.59■□□□□ 0.25
EXTL3O43909 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.59■□□□□ 0.25
EXTL3O43909 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.59■□□□□ 0.25
EXTL3O43909 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
EXTL3O43909 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
EXTL3O43909 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.59■□□□□ 0.25
EXTL3O43909 TMEM14DP-201ENST00000422205 345 ntBASIC16.59■□□□□ 0.25
EXTL3O43909 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.59■□□□□ 0.25
EXTL3O43909 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.59■□□□□ 0.25
EXTL3O43909 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.59■□□□□ 0.25
EXTL3O43909 AC017083.2-201ENST00000608069 979 ntBASIC16.59■□□□□ 0.25
EXTL3O43909 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
EXTL3O43909 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
EXTL3O43909 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
EXTL3O43909 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
EXTL3O43909 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.59■□□□□ 0.25
EXTL3O43909 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.59■□□□□ 0.25
EXTL3O43909 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EXTL3O43909 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EXTL3O43909 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.58■□□□□ 0.25
EXTL3O43909 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
EXTL3O43909 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
EXTL3O43909 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.58■□□□□ 0.25
EXTL3O43909 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EXTL3O43909 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
EXTL3O43909 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.58■□□□□ 0.25
EXTL3O43909 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EXTL3O43909 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EXTL3O43909 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
EXTL3O43909 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EXTL3O43909 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EXTL3O43909 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
EXTL3O43909 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
EXTL3O43909 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.58■□□□□ 0.24
EXTL3O43909 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EXTL3O43909 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
EXTL3O43909 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.58■□□□□ 0.24
EXTL3O43909 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
EXTL3O43909 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
EXTL3O43909 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EXTL3O43909 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.58■□□□□ 0.24
EXTL3O43909 AC079776.1-201ENST00000401540 1152 ntBASIC16.58■□□□□ 0.24
EXTL3O43909 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
EXTL3O43909 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms