Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 AC127383.1-201ENST00000444697 1800 ntBASIC11.06□□□□□ -0.64
PAX4O43316 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
PAX4O43316 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.06□□□□□ -0.64
PAX4O43316 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
PAX4O43316 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.06□□□□□ -0.64
PAX4O43316 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.06□□□□□ -0.64
PAX4O43316 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 PTENP1-202ENST00000532280 3996 ntBASIC11.06□□□□□ -0.64
PAX4O43316 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 Z97205.2-201ENST00000564697 1639 ntBASIC11.06□□□□□ -0.64
PAX4O43316 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.05□□□□□ -0.64
PAX4O43316 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 AC073347.1-201ENST00000421633 2643 ntBASIC11.05□□□□□ -0.64
PAX4O43316 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC11.05□□□□□ -0.64
PAX4O43316 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.05□□□□□ -0.64
PAX4O43316 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.05□□□□□ -0.64
PAX4O43316 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.05□□□□□ -0.64
PAX4O43316 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.05□□□□□ -0.64
PAX4O43316 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 INGX-202ENST00000489074 768 ntBASIC11.05□□□□□ -0.64
PAX4O43316 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.05□□□□□ -0.64
PAX4O43316 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.05□□□□□ -0.64
PAX4O43316 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.05□□□□□ -0.64
PAX4O43316 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.05□□□□□ -0.64
PAX4O43316 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC11.05□□□□□ -0.64
PAX4O43316 AC020658.6-201ENST00000623564 1870 ntBASIC11.05□□□□□ -0.64
PAX4O43316 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.05□□□□□ -0.64
PAX4O43316 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.05□□□□□ -0.64
PAX4O43316 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 AC099063.4-201ENST00000641099 1602 ntBASIC11.05□□□□□ -0.64
PAX4O43316 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
PAX4O43316 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 BTBD7P1-201ENST00000447253 1453 ntBASIC11.05□□□□□ -0.64
PAX4O43316 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
PAX4O43316 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PAX4O43316 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms