Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TSPAN4O14817 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.03□□□□□ -0.32
TSPAN4O14817 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TSPAN4O14817 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.03□□□□□ -0.32
TSPAN4O14817 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.03□□□□□ -0.32
TSPAN4O14817 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TSPAN4O14817 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.03□□□□□ -0.32
TSPAN4O14817 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.03□□□□□ -0.32
TSPAN4O14817 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.03□□□□□ -0.32
TSPAN4O14817 AL773604.1-201ENST00000617417 272 ntBASIC13.03□□□□□ -0.32
TSPAN4O14817 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TSPAN4O14817 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TSPAN4O14817 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.03□□□□□ -0.32
TSPAN4O14817 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.03□□□□□ -0.32
TSPAN4O14817 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
TSPAN4O14817 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TSPAN4O14817 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.03□□□□□ -0.32
TSPAN4O14817 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 FRMD8P1-201ENST00000440433 1524 ntBASIC13.03□□□□□ -0.32
TSPAN4O14817 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TSPAN4O14817 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.03□□□□□ -0.32
TSPAN4O14817 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TSPAN4O14817 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.02□□□□□ -0.32
TSPAN4O14817 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.02□□□□□ -0.32
TSPAN4O14817 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TSPAN4O14817 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.02□□□□□ -0.32
TSPAN4O14817 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TSPAN4O14817 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TSPAN4O14817 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TSPAN4O14817 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.32
TSPAN4O14817 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TSPAN4O14817 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TSPAN4O14817 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TSPAN4O14817 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.02□□□□□ -0.32
TSPAN4O14817 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TSPAN4O14817 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TSPAN4O14817 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TSPAN4O14817 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
TSPAN4O14817 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TSPAN4O14817 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
TSPAN4O14817 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TSPAN4O14817 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.02□□□□□ -0.32
TSPAN4O14817 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
TSPAN4O14817 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.02□□□□□ -0.33
TSPAN4O14817 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.02□□□□□ -0.33
TSPAN4O14817 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.02□□□□□ -0.33
TSPAN4O14817 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.02□□□□□ -0.33
TSPAN4O14817 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.02□□□□□ -0.33
TSPAN4O14817 AC018712.1-201ENST00000455767 687 ntBASIC13.02□□□□□ -0.33
TSPAN4O14817 OR7E14P-202ENST00000530490 1290 ntBASIC13.02□□□□□ -0.33
TSPAN4O14817 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.02□□□□□ -0.33
TSPAN4O14817 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.02□□□□□ -0.33
TSPAN4O14817 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.02□□□□□ -0.33
TSPAN4O14817 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.02□□□□□ -0.33
TSPAN4O14817 AC006557.2-201ENST00000592985 1240 ntBASIC13.02□□□□□ -0.33
TSPAN4O14817 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.02□□□□□ -0.33
TSPAN4O14817 AC107918.4-202ENST00000641623 219 ntBASIC13.02□□□□□ -0.33
TSPAN4O14817 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TSPAN4O14817 TUBB8P12-201ENST00000308911 1335 ntBASIC13.02□□□□□ -0.33
TSPAN4O14817 TUBB7P-202ENST00000428444 1305 ntBASIC13.02□□□□□ -0.33
TSPAN4O14817 TUBB8P7-204ENST00000567960 1332 ntBASIC13.02□□□□□ -0.33
TSPAN4O14817 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TSPAN4O14817 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
TSPAN4O14817 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TSPAN4O14817 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TSPAN4O14817 AC069224.1-201ENST00000566372 1715 ntBASIC13.02□□□□□ -0.33
TSPAN4O14817 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
TSPAN4O14817 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TSPAN4O14817 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TSPAN4O14817 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms