Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC25.48■■□□□ 1.67
CUX2O14529 AC092612.1-201ENST00000514501 998 ntBASIC25.48■■□□□ 1.67
CUX2O14529 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC25.48■■□□□ 1.67
CUX2O14529 URB1-AS1-201ENST00000534991 831 ntBASIC25.48■■□□□ 1.67
CUX2O14529 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC25.48■■□□□ 1.67
CUX2O14529 AC010976.2-201ENST00000609697 852 ntBASIC25.48■■□□□ 1.67
CUX2O14529 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CUX2O14529 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CUX2O14529 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CUX2O14529 AC012508.2-201ENST00000567613 1472 ntBASIC25.48■■□□□ 1.67
CUX2O14529 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC25.48■■□□□ 1.67
CUX2O14529 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC25.48■■□□□ 1.67
CUX2O14529 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CUX2O14529 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CUX2O14529 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC25.48■■□□□ 1.67
CUX2O14529 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC25.47■■□□□ 1.67
CUX2O14529 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC25.47■■□□□ 1.67
CUX2O14529 RN7SKP109-201ENST00000410592 316 ntBASIC25.47■■□□□ 1.67
CUX2O14529 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC25.47■■□□□ 1.67
CUX2O14529 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
CUX2O14529 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC25.47■■□□□ 1.67
CUX2O14529 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 AC020922.4-201ENST00000621389 339 ntBASIC25.47■■□□□ 1.67
CUX2O14529 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC25.47■■□□□ 1.67
CUX2O14529 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CUX2O14529 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CUX2O14529 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC25.47■■□□□ 1.67
CUX2O14529 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
CUX2O14529 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC25.47■■□□□ 1.67
CUX2O14529 CA12-203ENST00000422263 2556 ntTSL 2 BASIC25.47■■□□□ 1.67
CUX2O14529 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC25.47■■□□□ 1.67
CUX2O14529 RNA5SP359-201ENST00000364838 113 ntBASIC25.47■■□□□ 1.67
CUX2O14529 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
CUX2O14529 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CUX2O14529 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC25.47■■□□□ 1.67
CUX2O14529 RN7SL23P-201ENST00000484055 275 ntBASIC25.47■■□□□ 1.67
CUX2O14529 RN7SL582P-201ENST00000491078 279 ntBASIC25.47■■□□□ 1.67
CUX2O14529 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC25.47■■□□□ 1.67
CUX2O14529 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC25.47■■□□□ 1.67
CUX2O14529 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC25.47■■□□□ 1.67
CUX2O14529 AC138696.2-201ENST00000607376 223 ntBASIC25.47■■□□□ 1.67
CUX2O14529 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
CUX2O14529 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC25.47■■□□□ 1.67
CUX2O14529 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CUX2O14529 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
CUX2O14529 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC25.46■■□□□ 1.67
CUX2O14529 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC25.46■■□□□ 1.67
CUX2O14529 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC25.46■■□□□ 1.67
CUX2O14529 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 MARK2P16-201ENST00000605714 1723 ntBASIC25.46■■□□□ 1.67
CUX2O14529 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC25.46■■□□□ 1.67
CUX2O14529 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
CUX2O14529 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC25.46■■□□□ 1.67
CUX2O14529 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC25.46■■□□□ 1.67
CUX2O14529 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC25.46■■□□□ 1.67
CUX2O14529 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 AC008825.2-201ENST00000603374 718 ntBASIC25.46■■□□□ 1.67
CUX2O14529 MIR6720-201ENST00000611664 98 ntBASIC25.46■■□□□ 1.67
CUX2O14529 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CUX2O14529 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC25.46■■□□□ 1.67
CUX2O14529 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC25.46■■□□□ 1.67
CUX2O14529 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CUX2O14529 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CUX2O14529 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CUX2O14529 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
CUX2O14529 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CUX2O14529 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CUX2O14529 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CUX2O14529 AC025183.3-201ENST00000623526 1482 ntBASIC25.45■■□□□ 1.66
CUX2O14529 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CUX2O14529 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
CUX2O14529 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC25.45■■□□□ 1.66
CUX2O14529 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CUX2O14529 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CUX2O14529 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC25.45■■□□□ 1.66
CUX2O14529 RHOQP2-201ENST00000449922 579 ntBASIC25.45■■□□□ 1.66
CUX2O14529 GNG10P1-201ENST00000452289 199 ntBASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms