Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
UPK2O00526 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
UPK2O00526 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 TSEN15P1-201ENST00000423257 515 ntBASIC12.34□□□□□ -0.43
UPK2O00526 AC125807.1-201ENST00000483097 614 ntBASIC12.34□□□□□ -0.43
UPK2O00526 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.34□□□□□ -0.43
UPK2O00526 AC069120.2-201ENST00000524091 540 ntBASIC12.34□□□□□ -0.43
UPK2O00526 AC027369.6-201ENST00000525520 931 ntBASIC12.34□□□□□ -0.43
UPK2O00526 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
UPK2O00526 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.34□□□□□ -0.43
UPK2O00526 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
UPK2O00526 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.34□□□□□ -0.43
UPK2O00526 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.34□□□□□ -0.43
UPK2O00526 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
UPK2O00526 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.34□□□□□ -0.43
UPK2O00526 AC140479.7-201ENST00000636301 2332 ntBASIC12.34□□□□□ -0.43
UPK2O00526 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.34□□□□□ -0.43
UPK2O00526 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
UPK2O00526 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
UPK2O00526 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
UPK2O00526 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 AC087499.5-201ENST00000452760 1342 ntBASIC12.34□□□□□ -0.43
UPK2O00526 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK2O00526 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.34□□□□□ -0.43
UPK2O00526 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.33□□□□□ -0.43
UPK2O00526 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
UPK2O00526 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
UPK2O00526 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.33□□□□□ -0.43
UPK2O00526 AC005912.2-201ENST00000619492 2400 ntBASIC12.33□□□□□ -0.43
UPK2O00526 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
UPK2O00526 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
UPK2O00526 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
UPK2O00526 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
UPK2O00526 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.33□□□□□ -0.44
UPK2O00526 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
UPK2O00526 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
UPK2O00526 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.33□□□□□ -0.44
UPK2O00526 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
UPK2O00526 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
UPK2O00526 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
UPK2O00526 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
UPK2O00526 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.33□□□□□ -0.44
UPK2O00526 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.33□□□□□ -0.44
UPK2O00526 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 AL139400.1-201ENST00000366220 510 ntBASIC12.33□□□□□ -0.44
UPK2O00526 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.33□□□□□ -0.44
UPK2O00526 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.33□□□□□ -0.44
UPK2O00526 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.33□□□□□ -0.44
UPK2O00526 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.33□□□□□ -0.44
UPK2O00526 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.33□□□□□ -0.44
UPK2O00526 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.33□□□□□ -0.44
UPK2O00526 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.33□□□□□ -0.44
UPK2O00526 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.33□□□□□ -0.44
UPK2O00526 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.33□□□□□ -0.44
UPK2O00526 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.33□□□□□ -0.44
UPK2O00526 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.33□□□□□ -0.44
UPK2O00526 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.33□□□□□ -0.44
UPK2O00526 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK2O00526 TIMM17BP1-201ENST00000545713 516 ntBASIC12.33□□□□□ -0.44
UPK2O00526 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UPK2O00526 AC025678.2-201ENST00000562061 970 ntBASIC12.33□□□□□ -0.44
UPK2O00526 AC004449.1-201ENST00000564240 433 ntBASIC12.33□□□□□ -0.44
UPK2O00526 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
UPK2O00526 SAMD11P1-201ENST00000571429 661 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms