Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A1O00337 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SLC28A1O00337 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A1O00337 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC28A1O00337 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A1O00337 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A1O00337 TSEN15P1-201ENST00000423257 515 ntBASIC14.81□□□□□ -0.04
SLC28A1O00337 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A1O00337 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC28A1O00337 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC28A1O00337 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A1O00337 AC125807.1-201ENST00000483097 614 ntBASIC14.81□□□□□ -0.04
SLC28A1O00337 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC28A1O00337 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC28A1O00337 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC28A1O00337 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC28A1O00337 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC28A1O00337 AC025678.2-201ENST00000562061 970 ntBASIC14.81□□□□□ -0.04
SLC28A1O00337 AC000095.1-201ENST00000603208 874 ntBASIC14.81□□□□□ -0.04
SLC28A1O00337 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC28A1O00337 Z92544.3-201ENST00000624747 417 ntBASIC14.81□□□□□ -0.04
SLC28A1O00337 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SLC28A1O00337 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SLC28A1O00337 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A1O00337 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SLC28A1O00337 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC28A1O00337 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SLC28A1O00337 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC28A1O00337 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC28A1O00337 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A1O00337 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A1O00337 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A1O00337 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A1O00337 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A1O00337 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A1O00337 AC007787.1-201ENST00000588095 1583 ntBASIC14.81□□□□□ -0.04
SLC28A1O00337 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC28A1O00337 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC28A1O00337 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC28A1O00337 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC28A1O00337 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC28A1O00337 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC28A1O00337 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SLC28A1O00337 AC026748.1-201ENST00000624349 3251 ntBASIC14.8□□□□□ -0.04
SLC28A1O00337 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC28A1O00337 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A1O00337 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC28A1O00337 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC28A1O00337 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.8□□□□□ -0.04
SLC28A1O00337 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A1O00337 AC027369.6-201ENST00000525520 931 ntBASIC14.8□□□□□ -0.04
SLC28A1O00337 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC28A1O00337 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC28A1O00337 TIMM17BP1-201ENST00000545713 516 ntBASIC14.8□□□□□ -0.04
SLC28A1O00337 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC28A1O00337 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC28A1O00337 SAMD11P1-201ENST00000571429 661 ntBASIC14.8□□□□□ -0.04
SLC28A1O00337 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.8□□□□□ -0.04
SLC28A1O00337 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC28A1O00337 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC28A1O00337 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC28A1O00337 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 AC087499.5-201ENST00000452760 1342 ntBASIC14.8□□□□□ -0.04
SLC28A1O00337 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SLC28A1O00337 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC28A1O00337 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A1O00337 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A1O00337 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC28A1O00337 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A1O00337 AC140479.7-201ENST00000636301 2332 ntBASIC14.8□□□□□ -0.04
SLC28A1O00337 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A1O00337 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC28A1O00337 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC28A1O00337 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC28A1O00337 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A1O00337 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
SLC28A1O00337 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC28A1O00337 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms