Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 AC022144.1-201ENST00000602255 1580 ntBASIC14.56□□□□□ -0.08
UPK1AO00322 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
UPK1AO00322 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
UPK1AO00322 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
UPK1AO00322 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UPK1AO00322 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.56□□□□□ -0.08
UPK1AO00322 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1AO00322 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1AO00322 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1AO00322 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
UPK1AO00322 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1AO00322 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1AO00322 TIMM17BP1-201ENST00000545713 516 ntBASIC14.56□□□□□ -0.08
UPK1AO00322 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1AO00322 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.56□□□□□ -0.08
UPK1AO00322 AC092337.1-201ENST00000568699 1129 ntBASIC14.56□□□□□ -0.08
UPK1AO00322 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.56□□□□□ -0.08
UPK1AO00322 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1AO00322 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.56□□□□□ -0.08
UPK1AO00322 AC005498.2-205ENST00000593218 784 ntBASIC14.56□□□□□ -0.08
UPK1AO00322 AC008738.7-201ENST00000609744 511 ntBASIC14.56□□□□□ -0.08
UPK1AO00322 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.56□□□□□ -0.08
UPK1AO00322 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
UPK1AO00322 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 CICP11-201ENST00000434745 2827 ntBASIC14.56□□□□□ -0.08
UPK1AO00322 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1AO00322 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.56□□□□□ -0.08
UPK1AO00322 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.56□□□□□ -0.08
UPK1AO00322 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1AO00322 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1AO00322 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.55□□□□□ -0.08
UPK1AO00322 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.55□□□□□ -0.08
UPK1AO00322 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
UPK1AO00322 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1AO00322 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1AO00322 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.55□□□□□ -0.08
UPK1AO00322 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UPK1AO00322 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.55□□□□□ -0.08
UPK1AO00322 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
UPK1AO00322 KRT18P43-201ENST00000469825 1281 ntBASIC14.55□□□□□ -0.08
UPK1AO00322 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.55□□□□□ -0.08
UPK1AO00322 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1AO00322 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.55□□□□□ -0.08
UPK1AO00322 AC004840.1-201ENST00000636359 365 ntBASIC14.55□□□□□ -0.08
UPK1AO00322 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.55□□□□□ -0.08
UPK1AO00322 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.55□□□□□ -0.08
UPK1AO00322 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1AO00322 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UPK1AO00322 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.55□□□□□ -0.08
UPK1AO00322 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1AO00322 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
UPK1AO00322 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1AO00322 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
UPK1AO00322 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1AO00322 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1AO00322 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.54□□□□□ -0.08
UPK1AO00322 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.54□□□□□ -0.08
UPK1AO00322 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
UPK1AO00322 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK1AO00322 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms