Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA3F8WFD2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 CICP6-201ENST00000457191 2729 ntBASIC14□□□□□ -0.17
NPIPA3F8WFD2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 DRD5P1-201ENST00000456605 1438 ntBASIC14□□□□□ -0.17
NPIPA3F8WFD2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 AC007551.1-201ENST00000457394 519 ntBASIC14□□□□□ -0.17
NPIPA3F8WFD2 MFF-223ENST00000524634 647 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 AP001582.1-201ENST00000525856 295 ntBASIC14□□□□□ -0.17
NPIPA3F8WFD2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14□□□□□ -0.17
NPIPA3F8WFD2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA3F8WFD2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPA3F8WFD2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AC093525.8-201ENST00000624099 1342 ntBASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AC012441.1-201ENST00000446669 685 ntBASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AC092658.1-201ENST00000505836 891 ntBASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AC026410.3-201ENST00000514280 936 ntBASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AC093813.1-201ENST00000605066 256 ntBASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AC107373.2-201ENST00000607735 490 ntBASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AC090616.6-203ENST00000579186 1945 ntBASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 REXO1L6P-201ENST00000603433 1515 ntBASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms