Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AC004877.2-201ENST00000623941 599 ntBASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 AC105233.2-201ENST00000523697 349 ntBASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 AF228730.5-201ENST00000530288 346 ntBASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 AC073389.1-201ENST00000595595 795 ntBASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 MIR7706-201ENST00000613747 67 ntBASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 AL137784.3-201ENST00000623858 2288 ntBASIC13.22□□□□□ -0.29
MEIS3P1A6NDR6 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 AL121912.1-201ENST00000603683 238 ntBASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
MEIS3P1A6NDR6 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms