Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRBV5-4A0A0C4DH59 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 AL138709.1-201ENST00000614840 1693 ntBASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC005229.1-201ENST00000392885 409 ntBASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC106760.1-201ENST00000508690 800 ntBASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 CR383656.12-201ENST00000549567 513 ntBASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 GNRHR2-203ENST00000581100 1187 ntBASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC008735.3-201ENST00000596646 500 ntBASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 AC145423.3-201ENST00000615987 467 ntBASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV5-4A0A0C4DH59 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TRBV5-4A0A0C4DH59 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms