Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 RPL17P45-201ENST00000586289 509 ntBASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 SHC1P1-201ENST00000425230 1745 ntBASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ZC3H4Q9UPT8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 MIR3677-201ENST00000578964 60 ntBASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 AC018892.3-201ENST00000623986 2499 ntBASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H4Q9UPT8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 OR2K2-202ENST00000374428 1038 ntBASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 BCAS2P2-201ENST00000425064 674 ntBASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 PSMD4P1-201ENST00000433951 1109 ntBASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 AC012441.2-201ENST00000444843 739 ntBASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 RPL18AP3-201ENST00000462885 528 ntBASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms