Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 HINT1-205ENST00000508488 703 ntTSL 2 BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 HNRNPA1P5-201ENST00000558213 966 ntBASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 AC022966.2-201ENST00000587434 367 ntBASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 AC016582.2-202ENST00000587765 1094 ntBASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC23.35■■□□□ 1.33
RIMBP3Q9UFD9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 ACTBP9-201ENST00000587663 1099 ntBASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 CLPP-205ENST00000596605 646 ntTSL 2 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIMBP3Q9UFD9 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 PSAT1P2-201ENST00000426107 972 ntBASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 RPL18AP15-201ENST00000430258 517 ntBASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 AL035414.1-201ENST00000451327 857 ntBASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 MBP-230ENST00000528160 584 ntTSL 5 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 BX088702.1-201ENST00000610784 235 ntBASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC23.33■■□□□ 1.33
RIMBP3Q9UFD9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RIMBP3Q9UFD9 AC025594.1-201ENST00000469533 543 ntBASIC23.33■■□□□ 1.32
RIMBP3Q9UFD9 RN7SL672P-201ENST00000474091 317 ntBASIC23.33■■□□□ 1.32
RIMBP3Q9UFD9 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RIMBP3Q9UFD9 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC23.33■■□□□ 1.32
RIMBP3Q9UFD9 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
RIMBP3Q9UFD9 AL137783.1-201ENST00000623494 1896 ntBASIC23.33■■□□□ 1.32
RIMBP3Q9UFD9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 AC007952.5-201ENST00000572818 1486 ntBASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 AC007881.1-201ENST00000437460 187 ntBASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 AC025186.1-201ENST00000478174 870 ntBASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 RN7SL524P-201ENST00000581152 300 ntBASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 AC127383.1-201ENST00000444697 1800 ntBASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RIMBP3Q9UFD9 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 RNASEH2CP1-201ENST00000454281 502 ntBASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 AC092903.1-201ENST00000466506 262 ntBASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 AP001462.1-201ENST00000594089 452 ntBASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms