Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 AC055811.4-201ENST00000624039 1754 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 HLA-K-203ENST00000430151 1046 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 NKAIN1P1-201ENST00000435754 582 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 CHMP1AP1-201ENST00000445563 662 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 HIST2H2BB-201ENST00000449108 381 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 AC100850.1-201ENST00000506768 649 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 AP001002.3-201ENST00000623482 206 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 AL603764.1-201ENST00000636452 321 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 AC009090.5-201ENST00000624886 2285 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 LINC02228-204ENST00000642115 2962 ntBASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
DNMT3BQ9UBC3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 AL662890.1-201ENST00000396818 632 ntBASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 AC092506.1-202ENST00000401022 528 ntBASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 AC044849.1-201ENST00000519737 1188 ntBASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 AC005730.2-201ENST00000564549 1184 ntBASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 CLUHP2-201ENST00000426660 1303 ntBASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DNMT3BQ9UBC3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms