Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 HIST2H2BB-201ENST00000449108 381 ntBASIC15.18■□□□□ 0.02
NCDNQ9UBB6 RNMTL1P1-201ENST00000454103 560 ntBASIC15.18■□□□□ 0.02
NCDNQ9UBB6 AC079112.1-201ENST00000454972 939 ntBASIC15.18■□□□□ 0.02
NCDNQ9UBB6 RPL18P13-201ENST00000478088 569 ntBASIC15.18■□□□□ 0.02
NCDNQ9UBB6 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 AC090857.1-201ENST00000527400 390 ntBASIC15.18■□□□□ 0.02
NCDNQ9UBB6 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.18■□□□□ 0.02
NCDNQ9UBB6 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCDNQ9UBB6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 AC134407.2-201ENST00000625089 1978 ntBASIC15.17■□□□□ 0.02
NCDNQ9UBB6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 AL136295.7-201ENST00000619226 1200 ntBASIC15.17■□□□□ 0.02
NCDNQ9UBB6 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 AC004923.1-202ENST00000642106 209 ntBASIC15.17■□□□□ 0.02
NCDNQ9UBB6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 AL162727.3-201ENST00000635661 2787 ntBASIC15.17■□□□□ 0.02
NCDNQ9UBB6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NCDNQ9UBB6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCDNQ9UBB6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.16■□□□□ 0.02
NCDNQ9UBB6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCDNQ9UBB6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NCDNQ9UBB6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCDNQ9UBB6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCDNQ9UBB6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCDNQ9UBB6 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCDNQ9UBB6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCDNQ9UBB6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.16■□□□□ 0.02
NCDNQ9UBB6 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCDNQ9UBB6 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms