Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 AL645937.2-201ENST00000396808 931 ntBASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 FAM197Y7-201ENST00000432892 766 ntBASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 C2orf27AP3-201ENST00000434123 579 ntBASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 FO681548.1-201ENST00000455617 1132 ntBASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 AL354718.3-201ENST00000616414 581 ntBASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 CR382287.1-201ENST00000623954 586 ntBASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20BQ9P0W2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 AC078819.1-201ENST00000547454 765 ntBASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 AC012085.1-201ENST00000548270 765 ntBASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 RHOXF1P1-202ENST00000635473 501 ntBASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms