Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC52A1Q9NWF4 AC074138.1-201ENST00000611182 1303 ntBASIC21.55■■□□□ 1.04
SLC52A1Q9NWF4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 AL645933.1-201ENST00000440087 609 ntBASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 AC114501.1-201ENST00000445949 172 ntBASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 AC006122.1-201ENST00000493323 440 ntBASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 AL031713.1-201ENST00000564813 661 ntBASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 MIR6842-201ENST00000612539 65 ntBASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 HLA-C-210ENST00000640219 976 ntBASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SLC52A1Q9NWF4 AC144522.1-201ENST00000625111 1658 ntBASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 AC026320.2-201ENST00000434379 478 ntBASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 MIR3677-201ENST00000578964 60 ntBASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 AC242376.2-201ENST00000619355 883 ntBASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SLC52A1Q9NWF4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 AL109837.1-201ENST00000603272 613 ntBASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC52A1Q9NWF4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SLC52A1Q9NWF4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SLC52A1Q9NWF4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 RPL7P35-201ENST00000446943 740 ntBASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 AL035414.1-201ENST00000451327 857 ntBASIC21.51■■□□□ 1.03
SLC52A1Q9NWF4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms