Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 EIF3FP3-201ENST00000434851 1086 ntBASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 AL162726.2-201ENST00000438986 1017 ntBASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 MIR3197-201ENST00000582241 73 ntBASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 AC023090.2-201ENST00000625182 2110 ntBASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.99■□□□□ 0.31
BLOC1S4Q9NUP1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 ACKR1-201ENST00000368121 1240 ntBASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 AP001063.1-201ENST00000568332 529 ntBASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 AP005019.2-201ENST00000615104 511 ntBASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 AC018529.2-202ENST00000611482 3087 ntBASIC16.98■□□□□ 0.31
BLOC1S4Q9NUP1 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BLOC1S4Q9NUP1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms