Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 DGCR5-201ENST00000399539 862 ntBASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 WFDC1-204ENST00000613603 549 ntBASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 AL158070.2-201ENST00000623713 1621 ntBASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 AC023824.1-201ENST00000562945 2975 ntBASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 LINC02228-204ENST00000642115 2962 ntBASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMC4Q9NTJ3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 AL513477.1-201ENST00000602865 2407 ntBASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 AJ011931.1-201ENST00000618749 2492 ntBASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 SOCS2P1-201ENST00000417727 557 ntBASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 AC133539.2-201ENST00000604757 467 ntBASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMC4Q9NTJ3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 AP001582.1-201ENST00000525856 295 ntBASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 REXO1L5P-201ENST00000622260 2098 ntBASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.66■□□□□ 0.74
SMC4Q9NTJ3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMC4Q9NTJ3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMC4Q9NTJ3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SMC4Q9NTJ3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms