Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 C1QBPP1-201ENST00000400117 770 ntBASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 AC120045.2-201ENST00000567334 178 ntBASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 DRD5P1-201ENST00000456605 1438 ntBASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SDHAF3Q9NRP4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 NUS1P3-201ENST00000423502 862 ntBASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 AL162726.2-201ENST00000438986 1017 ntBASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 AC126365.1-201ENST00000578585 1514 ntBASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 AC009090.5-201ENST00000624886 2285 ntBASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SDHAF3Q9NRP4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms