Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 FO393414.2-201ENST00000405153 598 ntBASIC16.25■□□□□ 0.19
CD248Q9HCU0 MEP1AP4-201ENST00000423244 1087 ntBASIC16.25■□□□□ 0.19
CD248Q9HCU0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 HILS1-202ENST00000545329 423 ntBASIC16.25■□□□□ 0.19
CD248Q9HCU0 AC106886.1-201ENST00000568660 600 ntBASIC16.25■□□□□ 0.19
CD248Q9HCU0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 AL365330.1-201ENST00000607459 531 ntBASIC16.25■□□□□ 0.19
CD248Q9HCU0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.25■□□□□ 0.19
CD248Q9HCU0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD248Q9HCU0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 AC112504.1-201ENST00000623415 1841 ntBASIC16.24■□□□□ 0.19
CD248Q9HCU0 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 GPR53P-205ENST00000457298 1084 ntBASIC16.24■□□□□ 0.19
CD248Q9HCU0 RN7SL837P-201ENST00000463010 287 ntBASIC16.24■□□□□ 0.19
CD248Q9HCU0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 IGHV3-71-201ENST00000523324 359 ntBASIC16.24■□□□□ 0.19
CD248Q9HCU0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 AL391069.4-201ENST00000609583 481 ntBASIC16.24■□□□□ 0.19
CD248Q9HCU0 AC074044.1-201ENST00000609673 707 ntBASIC16.24■□□□□ 0.19
CD248Q9HCU0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 AC009090.5-201ENST00000624886 2285 ntBASIC16.24■□□□□ 0.19
CD248Q9HCU0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD248Q9HCU0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CD248Q9HCU0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms