Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.5□□□□□ -0.41
NKX6-2Q9C056 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 TRIM80P-201ENST00000455685 2848 ntBASIC12.5□□□□□ -0.41
NKX6-2Q9C056 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 PMS2P1-201ENST00000431037 1228 ntBASIC12.5□□□□□ -0.41
NKX6-2Q9C056 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 KRT17P6-201ENST00000453795 1220 ntBASIC12.5□□□□□ -0.41
NKX6-2Q9C056 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 AL022326.1-202ENST00000641533 845 ntBASIC12.5□□□□□ -0.41
NKX6-2Q9C056 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 NSUN5P1-202ENST00000421140 1535 ntBASIC12.49□□□□□ -0.41
NKX6-2Q9C056 NSUN5P2-203ENST00000457352 1529 ntBASIC12.49□□□□□ -0.41
NKX6-2Q9C056 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 AL160237.2-201ENST00000556165 472 ntBASIC12.49□□□□□ -0.41
NKX6-2Q9C056 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms