Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 RBM17P3-201ENST00000417687 1192 ntBASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 AC002347.1-201ENST00000569543 541 ntBASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 MIR3909-201ENST00000579518 119 ntBASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM3Q9BZL3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 PMS2P7-201ENST00000506558 1336 ntBASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 MEX3B-202ENST00000558133 4333 ntBASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 KRT16P4-201ENST00000453883 522 ntBASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 AC006557.2-201ENST00000592985 1240 ntBASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 AL732292.2-201ENST00000609649 430 ntBASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM3Q9BZL3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 AL356585.2-201ENST00000625078 2396 ntBASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM3Q9BZL3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms