Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL354702.1-201ENST00000442006 1960 ntBASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 GNAQP1-201ENST00000444815 1067 ntBASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 RN7SL399P-201ENST00000471648 279 ntBASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 FAM86LP-201ENST00000478302 853 ntBASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 AC004066.1-201ENST00000502488 802 ntBASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 RARRES2P5-201ENST00000564013 466 ntBASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 AC005498.2-205ENST00000593218 784 ntBASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 AL138799.1-201ENST00000448213 1675 ntBASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 CICP4-201ENST00000447359 2812 ntBASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 IGHV3-42-201ENST00000520410 361 ntBASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 PKD1P1-201ENST00000458669 6805 ntBASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO3Q9BXY4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms