Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMOQ99835 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMOQ99835 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMOQ99835 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMOQ99835 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.02■□□□□ 0.15
SMOQ99835 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.02■□□□□ 0.15
SMOQ99835 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SMOQ99835 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.02■□□□□ 0.15
SMOQ99835 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SMOQ99835 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMOQ99835 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMOQ99835 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SMOQ99835 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SMOQ99835 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SMOQ99835 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.02■□□□□ 0.15
SMOQ99835 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMOQ99835 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SMOQ99835 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.01■□□□□ 0.15
SMOQ99835 LILRP1-201ENST00000444199 1370 ntBASIC16.01■□□□□ 0.15
SMOQ99835 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SMOQ99835 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.01■□□□□ 0.15
SMOQ99835 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.01■□□□□ 0.15
SMOQ99835 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.01■□□□□ 0.15
SMOQ99835 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SMOQ99835 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 AC006001.1-201ENST00000325130 474 ntBASIC16.01■□□□□ 0.15
SMOQ99835 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.01■□□□□ 0.15
SMOQ99835 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.01■□□□□ 0.15
SMOQ99835 AC244107.1-201ENST00000442033 332 ntBASIC16.01■□□□□ 0.15
SMOQ99835 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 RNA5SP486-201ENST00000515961 83 ntBASIC16.01■□□□□ 0.15
SMOQ99835 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.01■□□□□ 0.15
SMOQ99835 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.01■□□□□ 0.15
SMOQ99835 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.01■□□□□ 0.15
SMOQ99835 ENPP7P14-201ENST00000621765 1040 ntBASIC16.01■□□□□ 0.15
SMOQ99835 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SMOQ99835 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.01■□□□□ 0.15
SMOQ99835 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.01■□□□□ 0.15
SMOQ99835 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SMOQ99835 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.01■□□□□ 0.15
SMOQ99835 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16■□□□□ 0.15
SMOQ99835 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
SMOQ99835 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SMOQ99835 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SMOQ99835 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16■□□□□ 0.15
SMOQ99835 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SMOQ99835 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16■□□□□ 0.15
SMOQ99835 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16■□□□□ 0.15
SMOQ99835 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16■□□□□ 0.15
SMOQ99835 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16■□□□□ 0.15
SMOQ99835 HLA-V-201ENST00000429037 534 ntBASIC16■□□□□ 0.15
SMOQ99835 CSF2RBP1-201ENST00000447905 391 ntBASIC16■□□□□ 0.15
SMOQ99835 BNIP3P42-201ENST00000454982 569 ntBASIC16■□□□□ 0.15
SMOQ99835 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 MFF-223ENST00000524634 647 ntTSL 2 BASIC16■□□□□ 0.15
SMOQ99835 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16■□□□□ 0.15
SMOQ99835 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16■□□□□ 0.15
SMOQ99835 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 BNIP3P29-201ENST00000598302 571 ntBASIC16■□□□□ 0.15
SMOQ99835 AC011447.5-201ENST00000616168 564 ntBASIC16■□□□□ 0.15
SMOQ99835 AL603764.1-201ENST00000636452 321 ntBASIC16■□□□□ 0.15
SMOQ99835 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms