Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 AC099336.1-202ENST00000602961 463 ntBASIC14.53□□□□□ -0.08
NR1H4Q96RI1 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 AL731571.1-201ENST00000617058 5428 ntBASIC14.53□□□□□ -0.08
NR1H4Q96RI1 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
NR1H4Q96RI1 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NR1H4Q96RI1 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 NUS1P2-201ENST00000417358 873 ntBASIC14.52□□□□□ -0.09
NR1H4Q96RI1 IGHV3-47-201ENST00000425060 335 ntBASIC14.52□□□□□ -0.09
NR1H4Q96RI1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 AC093724.1-201ENST00000448659 1027 ntBASIC14.52□□□□□ -0.09
NR1H4Q96RI1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 AC005412.3-201ENST00000580309 715 ntBASIC14.52□□□□□ -0.09
NR1H4Q96RI1 MIR4321-201ENST00000592276 80 ntBASIC14.52□□□□□ -0.09
NR1H4Q96RI1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 AC073592.4-201ENST00000623827 446 ntBASIC14.52□□□□□ -0.09
NR1H4Q96RI1 AL358472.4-201ENST00000633140 710 ntBASIC14.52□□□□□ -0.09
NR1H4Q96RI1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 AP000550.4-202ENST00000639755 178 ntBASIC14.52□□□□□ -0.09
NR1H4Q96RI1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 AC068760.1-201ENST00000493579 1953 ntBASIC14.52□□□□□ -0.09
NR1H4Q96RI1 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NR1H4Q96RI1 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 AC138969.3-201ENST00000546612 1459 ntBASIC14.51□□□□□ -0.09
NR1H4Q96RI1 AC138932.2-201ENST00000548268 1459 ntBASIC14.51□□□□□ -0.09
NR1H4Q96RI1 AC126755.4-201ENST00000549796 1459 ntBASIC14.51□□□□□ -0.09
NR1H4Q96RI1 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 KRT8P22-201ENST00000562317 1415 ntBASIC14.51□□□□□ -0.09
NR1H4Q96RI1 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H4Q96RI1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms