Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 DUX4L27-201ENST00000554796 1261 ntBASIC16.26■□□□□ 0.19
TRIM11Q96F44 AC009407.1-201ENST00000568958 598 ntBASIC16.26■□□□□ 0.19
TRIM11Q96F44 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 AL390754.1-201ENST00000619088 582 ntBASIC16.26■□□□□ 0.19
TRIM11Q96F44 AC139530.3-201ENST00000620344 690 ntBASIC16.26■□□□□ 0.19
TRIM11Q96F44 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 AC055876.3-201ENST00000431496 288 ntBASIC16.25■□□□□ 0.19
TRIM11Q96F44 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 AC135586.1-201ENST00000539323 574 ntBASIC16.25■□□□□ 0.19
TRIM11Q96F44 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 AC036164.1-201ENST00000570544 333 ntBASIC16.25■□□□□ 0.19
TRIM11Q96F44 SRD5A3P1-201ENST00000603021 949 ntBASIC16.25■□□□□ 0.19
TRIM11Q96F44 AL391069.4-201ENST00000609583 481 ntBASIC16.25■□□□□ 0.19
TRIM11Q96F44 AC138649.4-201ENST00000612222 287 ntBASIC16.25■□□□□ 0.19
TRIM11Q96F44 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 AC022144.1-201ENST00000602255 1580 ntBASIC16.25■□□□□ 0.19
TRIM11Q96F44 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TRIM11Q96F44 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 AC232323.1-201ENST00000540724 2099 ntBASIC16.25■□□□□ 0.19
TRIM11Q96F44 REXO1L5P-201ENST00000622260 2098 ntBASIC16.25■□□□□ 0.19
TRIM11Q96F44 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM11Q96F44 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms