Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.32■□□□□ 0.2
DDX1Q92499 COX11-210ENST00000639671 696 ntBASIC16.32■□□□□ 0.2
DDX1Q92499 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.32■□□□□ 0.2
DDX1Q92499 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.32■□□□□ 0.2
DDX1Q92499 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DDX1Q92499 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.32■□□□□ 0.2
DDX1Q92499 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
DDX1Q92499 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.31■□□□□ 0.2
DDX1Q92499 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.31■□□□□ 0.2
DDX1Q92499 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.31■□□□□ 0.2
DDX1Q92499 AL138799.1-201ENST00000448213 1675 ntBASIC16.31■□□□□ 0.2
DDX1Q92499 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DDX1Q92499 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
DDX1Q92499 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DDX1Q92499 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
DDX1Q92499 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 AC092506.1-202ENST00000401022 528 ntBASIC16.31■□□□□ 0.2
DDX1Q92499 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.31■□□□□ 0.2
DDX1Q92499 HLA-K-203ENST00000430151 1046 ntBASIC16.31■□□□□ 0.2
DDX1Q92499 TTTY23B-201ENST00000442790 549 ntBASIC16.31■□□□□ 0.2
DDX1Q92499 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.31■□□□□ 0.2
DDX1Q92499 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.31■□□□□ 0.2
DDX1Q92499 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DDX1Q92499 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.31■□□□□ 0.2
DDX1Q92499 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DDX1Q92499 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.31■□□□□ 0.2
DDX1Q92499 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.31■□□□□ 0.2
DDX1Q92499 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
DDX1Q92499 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DDX1Q92499 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.31■□□□□ 0.2
DDX1Q92499 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DDX1Q92499 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.3■□□□□ 0.2
DDX1Q92499 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
DDX1Q92499 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DDX1Q92499 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 LILRP1-201ENST00000444199 1370 ntBASIC16.3■□□□□ 0.2
DDX1Q92499 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
DDX1Q92499 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DDX1Q92499 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 BOLA2P3-201ENST00000404566 256 ntBASIC16.3■□□□□ 0.2
DDX1Q92499 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.3■□□□□ 0.2
DDX1Q92499 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 BCYRN1-201ENST00000418539 200 ntBASIC16.3■□□□□ 0.2
DDX1Q92499 AC098850.1-201ENST00000419919 790 ntBASIC16.3■□□□□ 0.2
DDX1Q92499 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
DDX1Q92499 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.3■□□□□ 0.2
DDX1Q92499 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.3■□□□□ 0.2
DDX1Q92499 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.3■□□□□ 0.2
DDX1Q92499 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.3■□□□□ 0.2
DDX1Q92499 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.3■□□□□ 0.2
DDX1Q92499 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.3■□□□□ 0.2
DDX1Q92499 AL513477.1-201ENST00000602865 2407 ntBASIC16.3■□□□□ 0.2
DDX1Q92499 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DDX1Q92499 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.29■□□□□ 0.2
DDX1Q92499 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
DDX1Q92499 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DDX1Q92499 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.29■□□□□ 0.2
DDX1Q92499 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms