Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PIK3C3Q8NEB9 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PIK3C3Q8NEB9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PIK3C3Q8NEB9 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PIK3C3Q8NEB9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PIK3C3Q8NEB9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.49□□□□□ -0.09
PIK3C3Q8NEB9 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PIK3C3Q8NEB9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.49□□□□□ -0.09
PIK3C3Q8NEB9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.49□□□□□ -0.09
PIK3C3Q8NEB9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 AC136604.1-201ENST00000418535 575 ntBASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 AP000344.2-201ENST00000512987 629 ntBASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 AC105339.1-204ENST00000636249 355 ntBASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 BX640514.1-201ENST00000583223 1918 ntBASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PIK3C3Q8NEB9 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 UXT-AS1-201ENST00000590504 1525 ntBASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 AC079781.5-202ENST00000641784 3743 ntBASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 AC022145.2-201ENST00000598203 171 ntBASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 AL513210.1-201ENST00000629608 234 ntBASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PIK3C3Q8NEB9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms