Protein–RNA interactions for Protein: Q8NDZ4

C3orf58, Deleted in autism protein 1, humanhuman

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf58Q8NDZ4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 TMBIM7P-203ENST00000641617 1718 ntBASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 MIR1247-201ENST00000408206 136 ntBASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 AC104306.2-201ENST00000451877 341 ntBASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf58Q8NDZ4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 REXO1L2P-201ENST00000425429 2069 ntBASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 INE2-201ENST00000630399 1874 ntBASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 KRT8P4-201ENST00000509735 1454 ntBASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 MESTP3-201ENST00000503460 968 ntBASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf58Q8NDZ4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf58Q8NDZ4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms